Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2122 ATGGATGCCTCATCTCCCATGCCGTTTCAAGACCTTCCAGAAGCTTCCCCAAAACCATACAAGAAAAGCTTCGTCACCACTTTAATGGAGGCCGCCACCCTTCGGACGCCTTCATTCAAAGAAGACACCTACTTTGTTTCCCACTTGAGGTCTTCGGAGAAGAAAGCCCTGCAAGAGCTCAAGGACAAGCTTATCGCCTCGGAGGCCTCTGAAGCGTCTATGTGGGGTGTTTCTCTGCTTGGGGGCGATGACAAAGCTGATGTAATACTCTTGAAGTTTCTGAGAGCCAGAGACTTCAGGGTTGGGGATGCTCTTAACATGCTTCTGAAGTGCTTGGCTTGGAGGAAAGAGTTCGGAGCAGAAGGAATCGTTGAAGAAGACTTGGGGTTCAAAGAGCTTGAAGGGGTTATAGCTTATATGCACGGGTATGACAAAGAGGGACACCCTGTTTGCTACAATGCTTATGGGGTATTCAGAGACAAAGAAATGTACGAAAGAATATTTGGGAACGAAGAGAAGCTGAAGAAGTTTCTGAGATGGAGAGTTCGAGTTCTCGAAAAAGGTATCAAACTTCTCCATTTTAAGCCTGGTGGAGTCAATTCTATCATACAAGTCACTGACCTCAAGGACATGCCCAAGAGAGAGCTCAGGGTGGCTTCTAATCAGATCCTCTCTCTGTTCCAAGACAATTATCCAGAAATGGTGGCTCGTAAGATTTTCATCAATGTCCCATGGTACTTCAGCATGCTATATTCGATGTTCAGTCCCTTTCTTACTCAACGTACAAAGAGCAAGTTCGTAATCTCTAAGGAAGGAAATGCTGCGGAGACACTCTACAAATTTATAAGGCCCGAGGATATTCCAGTTCAGTATGGTGGACTGAGTAGGCCCATGGATTTGCAGAATGGTCCCCCAAAACCTGCATCGGAGTTCACAGTAAAAGGAGGAGAGAAAGTGAACATACAGATAGAAGGAATTGAGGCTGGAGCAACGATCACATGGGACATAGTGGTGGGAGGGTGGGAGTTGGAGTACAGTGCAGAGTTTGTGCCAAGTGCAGAAGGAAGCTACACCATAGCAGTAGAGAAACCAAGGAAGATTGGAGCCTCAGAAGAAGCAATCCACAATTCATTCACATCAAGAGAAGCAGGCAAGATGGTACTCTCTGTTGATAACACTAACTCCCGCAGGAAAAAAGTTGCTGCTTATCGCTACATTGTCAGAAAATGCACCACCACAACCTCAACCACCACCACCTGA 1260 0.4627 MDASSPMPFQDLPEASPKPYKKSFVTTLMEAATLRTPSFKEDTYFVSHLRSSEKKALQELKDKLIASEASEASMWGVSLLGGDDKADVILLKFLRARDFRVGDALNMLLKCLAWRKEFGAEGIVEEDLGFKELEGVIAYMHGYDKEGHPVCYNAYGVFRDKEMYERIFGNEEKLKKFLRWRVRVLEKGIKLLHFKPGGVNSIIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVQYGGLSRPMDLQNGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWELEYSAEFVPSAEGSYTIAVEKPRKIGASEEAIHNSFTSREAGKMVLSVDNTNSRRKKVAAYRYIVRKCTTTTSTTTT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2122 419 FunFam SEC14 cytosolic factor family protein 134 309 - -
Glsi07g2122 419 Gene3D - 29 117 - -
Glsi07g2122 419 FunFam SEC14 cytosolic factor family protein 45 117 - -
Glsi07g2122 419 ProSiteProfiles GOLD domain profile. 275 409 IPR009038 -
Glsi07g2122 419 CDD SEC14 130 294 IPR001251 -
Glsi07g2122 419 SMART CRAL_TRIO_N_2 86 111 IPR011074 -
Glsi07g2122 419 PANTHER PATELLIN-1 27 409 IPR044834 GO:0008289
Glsi07g2122 419 Pfam CRAL/TRIO, N-terminal domain 56 109 IPR011074 -
Glsi07g2122 419 SUPERFAMILY CRAL/TRIO N-terminal domain 43 127 IPR036273 -
Glsi07g2122 419 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 125 299 IPR001251 -
Glsi07g2122 419 SUPERFAMILY CRAL/TRIO domain 131 296 IPR036865 -
Glsi07g2122 419 Gene3D - 130 303 IPR036865 -
Glsi07g2122 419 SMART sec14_4 132 296 IPR001251 -
Glsi07g2122 419 Pfam CRAL/TRIO domain 134 293 IPR001251 -
Glsi07g2122 419 Gene3D GOLD domain 304 407 - -
Glsi07g2122 419 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 310 409 IPR036598 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2122 Glsi-ChrGlsi07 65596222 65598559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2122 90 288 Acyl Lipid Metabolism Gene Families AT1G55840 28.230 2.31e-12 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1987 06 67208883 67210807 Glsi07g2122 07 65596222 65598559 CCT