Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0505 ATGCAACAAGTTGGGCAGCCTAAATCTTCTAATGGATATGGCCGTCGAAAATCCGAAAGAGAAGGGGCATTTAAGTCAGAGAATAAGATCCAGTCTGGAAAATCAAATGCCAGCCGACTGGCAAGTACAGGTGCAGTGACTGGCACTAAAGGTGGTAATTATGAGAGTCCTTCACATGATCGTCTATTGTACGTAGCAACTTGTCTTATTGGGCAGCAGGTGGAAGTCCACGTGAAAAATGGATCTATATACTCTGGAATTTTTCATGCAACAAATGCTGACAAAGATTTTGGAATCATATTGAAGATGGCACGCTTGACGAAGGATGCTTCTCTTCGAGGGCAGAGGTCTGGTGTAGAATTTTTGAGCAAGGCTCCTTCAAAGACATTGATTATACCAGGCAAAGATCTTGTACAAGTCATAGCAAAGGGCGTTGCTATTACCAGGGATGGCCTACCTAGTGAATCTCAGCATGAAACGCATCAAGAGATTATGGTTGATTCAGCAATATCTCATTCTCGTCATGTTGAGATAGAGAGAGAACTACAACCTTGGGTACCTGATGGAGATGATCCCCAATGCCCCGAGCTGGAAAATATATTTGATGGCACTTGGAATAGGGGATGGGATCAATTTGAAACAAATAAAACATTGTTCGGAGTAAAAAGCACATTCAATGAGGAACTGTATACAACAAAGCTTGAAAAGGGGCCTCAAATGAGGGAGTTGGAAAAACAAGCTTTAAGAATAGCAAGAGAAATTGAATGCGAGGAAACCAGAGATCTTCATCTAGCAGAGGAAAGAGGCATTCTCTTAGATGAAAACTTTGATATTGATGAAGAGGCCAGATTCTCTTCAGTCTGTAGAGGTAAAGGAGTTGATGACTGTGGATATGATGAAAGTGAGGACATACTGTCAGATTCCCAAAATTCTGAAACATTTGGCGGTACGTTTGCTTCAGTCATCAAGAAATCCAGTGATTTAATTGGTGGAAAAGGCAACGATGGAGCTCGAATATCATCAGATTCCTCCTTTATGGATCTCCCACAGTCGTCTCAGTCAGATATTGGTGTGGATCTAAGCCGCTCTGGTTCTTATGATCATGCTAACCAATTAGCATCTGAAATCCCTGCCAAAAGTTACCCTTCTTTGGATGGTGAAAGCAGAGTTCAGGAGAATTCGGTTGTTGATCAACATGGAGCCAATGATAGTACCAAAGAAGAAAATAAAATACGAGCTGAGGATGTTCATCTGTCAAATTCTGAGGATTCACAGTCATTGCTCGACTTGAAGAAAGATGGCTCTGATATAAGGGGAATATCTCCAAAAGCCACCTCCTATGTCCCTTCATCTCATATTTTATTAAGTACTCATGAAAAGAGAGGGTCACCTGATGATTTGATTGAGAAGTCAGCTTCTGTTAAAATTAATGGGGAAACAAAGTCTGTAAACTCCCGTGGAAGACCAGGTAGTTCTACATCATCTGGTTCAGAGTGTGTGGGAGGTGTGGCAGCATCTTCCGGCCCTGGTCTCTCACCAAGTTCTTCAGTTGGTTCATTATCTTCTGAAAGATCGACTCTGAATCCCAATGCAAAGGATTTCAAGCTTAATCCTAATGCAAAGAGCTTTGTTCCATCTCAAGCACCTGTTAGACCTCCCTCCCCAGCGTCAGATGGTTCCTTCTATTTCCCTACTAATGTAACCAGTGTACCACCACATATGCCAGCCATGCCCATTGGTGTGGGAATGGGACCTACATTTTCTGGACCACAACATTTCGTATATAATCCACAGGTAGCACAAATGCCATCGCTAACGTATATTCATCCAAATGGACCACAGTATGGGCAGCTTCTTGGTCATCCCAGGCAAGTAATGTACATGCCAGGTTACCTACCTGAAACACCGTATAAGGGACGGGATTATTAG 1929 0.4256 MQQVGQPKSSNGYGRRKSEREGAFKSENKIQSGKSNASRLASTGAVTGTKGGNYESPSHDRLLYVATCLIGQQVEVHVKNGSIYSGIFHATNADKDFGIILKMARLTKDASLRGQRSGVEFLSKAPSKTLIIPGKDLVQVIAKGVAITRDGLPSESQHETHQEIMVDSAISHSRHVEIERELQPWVPDGDDPQCPELENIFDGTWNRGWDQFETNKTLFGVKSTFNEELYTTKLEKGPQMRELEKQALRIAREIECEETRDLHLAEERGILLDENFDIDEEARFSSVCRGKGVDDCGYDESEDILSDSQNSETFGGTFASVIKKSSDLIGGKGNDGARISSDSSFMDLPQSSQSDIGVDLSRSGSYDHANQLASEIPAKSYPSLDGESRVQENSVVDQHGANDSTKEENKIRAEDVHLSNSEDSQSLLDLKKDGSDIRGISPKATSYVPSSHILLSTHEKRGSPDDLIEKSASVKINGETKSVNSRGRPGSSTSSGSECVGGVAASSGPGLSPSSSVGSLSSERSTLNPNAKDFKLNPNAKSFVPSQAPVRPPSPASDGSFYFPTNVTSVPPHMPAMPIGVGMGPTFSGPQHFVYNPQVAQMPSLTYIHPNGPQYGQLLGHPRQVMYMPGYLPETPYKGRDY 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0505 642 MobiDBLite consensus disorder prediction 13 27 - -
Glsi07g0505 642 MobiDBLite consensus disorder prediction 475 501 - -
Glsi07g0505 642 MobiDBLite consensus disorder prediction 508 544 - -
Glsi07g0505 642 MobiDBLite consensus disorder prediction 473 557 - -
Glsi07g0505 642 MobiDBLite consensus disorder prediction 340 364 - -
Glsi07g0505 642 MobiDBLite consensus disorder prediction 376 427 - -
Glsi07g0505 642 MobiDBLite consensus disorder prediction 28 53 - -
Glsi07g0505 642 Pfam LsmAD domain 219 289 IPR009604 -
Glsi07g0505 642 SMART LsmAD_2 219 290 IPR009604 -
Glsi07g0505 642 MobiDBLite consensus disorder prediction 1 53 - -
Glsi07g0505 642 Pfam Ataxin-2 C-terminal region 533 546 IPR009818 -
Glsi07g0505 642 Coils Coil 240 260 - -
Glsi07g0505 642 Gene3D - 67 140 - -
Glsi07g0505 642 PANTHER ATAXIN 2-RELATED 32 634 IPR045117 GO:0003723
Glsi07g0505 642 MobiDBLite consensus disorder prediction 401 419 - -
Glsi07g0505 642 Pfam Ataxin 2 SM domain 59 143 IPR025852 -
Glsi07g0505 642 MobiDBLite consensus disorder prediction 386 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0505 Glsi-ChrGlsi07 4437764 4443428 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0436 06 3739353 3745937 Glsi07g0505 07 4437764 4443428 CCT
Glsi07g0505 07 4437764 4443428 Glsi07g0505 07 4437764 4443428 ECH