Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0436 ATGATGAGTTTGCAACAAGTTGGGCAATCTAGATCCTCTAATGGATATGGCCGTCGAAAATCTGAAAGAGAAGGGGCAGCTAAGTCAGAGAATAGGATCCTGTCTGGAAAGCCAAATGCCAACAGATTGGCTAGTACAGGTGCAGTTACTGGCACTATAGGTGGTAGTTTTGAGGGTCCTTCACGCGATAGACTAGTATATGTAACAACATGTCTTATTGGGCAGCAGGTGGAAGTCCAGGTGAAAAATGGATCTGTATACTCTGGAATATTTCATGCAACAAATGCTGATAAAGACTTTGGAATCATTTTGAAGATGGCTCGCTTGACAAAGGATGTTTCTTTGCAAGGGCAGAAGTCTGCTGTAGAAGCGGTGAGCAAGGCTCCTTCAAAGACTTTAATCATACCTGCCAAAGAACTTGTACAAGTCATAGCGAAGAGTGTTGCTGTTACGAGGGATGGCCTACCTAGTGAAGCTCACCGTGAAATGCATCAGGAGATCATGGTTGATTCAGTAATATCGCAATCCCGTCATGTTGACATAGAGCGAGAACTACAACCCTGGGTGCCTGATGAAGATGATCCACAATGCCCTGAACTAGAAAATATCTTTGATGGCCCTTGGAATAGGGGCTGGGATCAGTTTGAAACAAACGAAACTTTGTTTGGTGTAAGAAGCACGTTCAATGAGGAACTATATACAACAAAGCTTGAAAAAGGACCTCAGACAAGAGATTTGGAGAAACAAGCTTTAAAAATAGCAAGAGAAATTGAGGGTGAGGAAACCCAAGATCTTCATCTAGCAGAGGAAAGAGGCCTTTATCAACATAAAAACTTTGATGTTGATGAAGAGACTAGATTTTCTTCAGTCTATAGAGATAAAGGGGTTGATGACAGTGGATATGATGAAAATGAGGACATGCTGTTGGATTCGCACAATTCTGAAACCTTTGGTAGTACGTTGGCTCCAGACATTAGGAGATCTGGTGAATTAATTTGTGGAAAAGGCAATGATGGAGCTCGAACATCATCAAATTCCTCCTCTATGGATCTCCCACAATCGTCTCAGTCATGTACTGGTGTGGATTTAAGCCGTTCTGGTTCTCATGATCATGCTAAGCAGTTAGCATCTGAACTCCCTGCCAAAAGTGACCCTACTTTGGATGGAGATAGCAGGGTTCAGGAGAACTTGCTTAGTGATCTGCATGGAGCCAATGGTAATAGCAAGGAAGAAAGTCAGATAGAAGCCGATGATGTTCAGCTGTCAAAATCTGAGGATTTACAGTCATCACTGAATTTGAAGAAAGATGGCTCTGATAAAGGGGGATTATCTGCGAATGCCACCTCTTATGCTCCTTCATCTCATATTTTATCAAAGACTCCTGAAAAGACAGGTTTGCCTGGTGATTTTATTGAGGGTTCATTGTCTGGCAAAGGTAAAGGGGAATCAAATTCCGTGAACTCCCTTGGTAGAGCTGGTAGTTCTACATCATCTGGTTCAGATTGTGTGAGAGGTGTTACAGCATCTTCTGGCCCTGGTCTATCACCAAGTTCTTCAGTTGGTTCATTATCTTCTGAAAGATCGACTCTGAATCCCAATGCAAAGGAATTCAAGCTCAACCCTAATGCAAAGAGTTTCGTTCCATCTCAAGCACCTGTTAGGCCTCCTTCCCCAGTGTCAGATGGCTCCTTCTATTTCCCAACTAATGTAACTACCGTACCACATATGCCAGCCATGCCCATGGATATTGGAATGGGACCTACGTTTCCTGGGCCGCAATCTGTCCTTTATAATCCACAGGTAGCACAAATGCCATCACAACCATATTTTCATCCAAATGGACCACAGTATGGGCAGCTTCTTGGTCATCCTAGGCAAGTATTGTACATGCCAGGTTATCTGCCTGAAACGCCATATAAGGGACGGGATTACTAA 1935 0.432 MMSLQQVGQSRSSNGYGRRKSEREGAAKSENRILSGKPNANRLASTGAVTGTIGGSFEGPSRDRLVYVTTCLIGQQVEVQVKNGSVYSGIFHATNADKDFGIILKMARLTKDVSLQGQKSAVEAVSKAPSKTLIIPAKELVQVIAKSVAVTRDGLPSEAHREMHQEIMVDSVISQSRHVDIERELQPWVPDEDDPQCPELENIFDGPWNRGWDQFETNETLFGVRSTFNEELYTTKLEKGPQTRDLEKQALKIAREIEGEETQDLHLAEERGLYQHKNFDVDEETRFSSVYRDKGVDDSGYDENEDMLLDSHNSETFGSTLAPDIRRSGELICGKGNDGARTSSNSSSMDLPQSSQSCTGVDLSRSGSHDHAKQLASELPAKSDPTLDGDSRVQENLLSDLHGANGNSKEESQIEADDVQLSKSEDLQSSLNLKKDGSDKGGLSANATSYAPSSHILSKTPEKTGLPGDFIEGSLSGKGKGESNSVNSLGRAGSSTSSGSDCVRGVTASSGPGLSPSSSVGSLSSERSTLNPNAKEFKLNPNAKSFVPSQAPVRPPSPVSDGSFYFPTNVTTVPHMPAMPMDIGMGPTFPGPQSVLYNPQVAQMPSQPYFHPNGPQYGQLLGHPRQVLYMPGYLPETPYKGRDY 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0436 644 MobiDBLite consensus disorder prediction 1 15 - -
Glsi06g0436 644 MobiDBLite consensus disorder prediction 442 460 - -
Glsi06g0436 644 SMART LsmAD_2 222 293 IPR009604 -
Glsi06g0436 644 PANTHER ATAXIN 2-RELATED 35 636 IPR045117 GO:0003723
Glsi06g0436 644 MobiDBLite consensus disorder prediction 329 558 - -
Glsi06g0436 644 MobiDBLite consensus disorder prediction 478 547 - -
Glsi06g0436 644 Gene3D - 69 127 - -
Glsi06g0436 644 MobiDBLite consensus disorder prediction 1 41 - -
Glsi06g0436 644 MobiDBLite consensus disorder prediction 390 410 - -
Glsi06g0436 644 Pfam Ataxin 2 SM domain 62 146 IPR025852 -
Glsi06g0436 644 MobiDBLite consensus disorder prediction 16 30 - -
Glsi06g0436 644 MobiDBLite consensus disorder prediction 338 364 - -
Glsi06g0436 644 Pfam LsmAD domain 222 292 IPR009604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0436 Glsi-ChrGlsi06 3739353 3745937 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0436 06 3739353 3745937 Glsi07g0505 07 4437764 4443428 CCT
Glsi06g0436 06 3739353 3745937 Glsi06g0436 06 3739353 3745937 ECH