Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0417 ATGGCTTCAGTTGGTGCAGTCAAATTTTTGCTGTGCTTAGTTCTATGGCTCTCTAGCTCTCTATCTCCTTGTCAAGGTAAGCAGAACTGGTACAAATATCGGTACCCATTTATCAGAAGGGCAAGCTCATTCTCATCTTCATCATCAACATCAGCCAGCGCCAGCAACAATGCCTATGACTACATCATAGTGGGAGGTGGCACCGCAGGGTGCCCTTTGGCTGCAACTTTATCTCAAAAGTTCAGTGTTTTGCTGCTTGAAAGAGGAGGTGTCCCTTTCGCCAACCCAAAGGTCTCATTTCTAGAGAACTTCCACATTACCTTGGCGGACACTTCACCATCTTCAGCTTCCCAATACTTCATTTCTACAGATGGAGTCCTTAATGCTAGGGCCCGGGTTTTGGGTGGCGGCAGCTCCATTAATGCTGGCTTCTACACCAGAGCAAGCTCAAGGTTTATTCAAAAAGTAGGGTGGGATCCCAAGTTGGTGAATGAGTCTTACCCATGGGTTGAGAAGCAAATTGTTCACCGTCCAAAGCTTGCTCCTTGGCAGAGAGCAGTGAGGGACGGCCTCCTGGATGCTGGTGTGTCTCCTTTTAATGGTTTCACCTATGATCATGTCTATGGGACCAAGGTTGGTGGAACCATTTTTGACAGATTTAGTCGCCGCCACACAGCTGCTGAACTGCTTGCCTCAGCAAACCCTCAAAAGCTCTCTGTTTTGATCTATGCCACTGTCCAAAAGATTGTTTTTGATACAAGAGGGAAAAGGCCAAGAGCTGTGGGGGTTATCTTCAAAGATGAGAATGGGAAACAGCATCACGCAGTTCTGGGGAATCATAGGCAGAGTGAAGTTATAGTGTCCAGTGGGGCAATTGGGTCTCCTCAATTGCTAATGCTCAGTGGAATTGGACCAAAAGCAGAACTCCAAAACTTGAACATCTCAGTGGTGCTTAACAACCCTTTTGTTGGGAAGGGCATGGCTGATAACCCCATGAACACAATCTTTGTTCCTTCCAATAGACCAGTTCGGCAGTCACTCATAGAAACTGTGGGTATTACGAAACTGGGTGTGTACATTGAAGCTAGCAGTGGGTTTGGTCAGTCCAACGATAGCATTCACTGCCACCACGGTATCTTGTCAGCAGAGATTGGTCAGCTCTCCACAATTCCTCCCAAGCAAAGATCACCAGAAGCTGTCAAAGATTTTGTCAAGGGAAAGCGAGAATTACCAATTGAAGCATTCAGGGGAGGCTTCATCTTGTCAAAAGTTGCCAATCCTTGGTCAACAGGTGAGCTCAGGCTGATCAATACCAATGTGGAGGACAATCCAGCTGTTACCTTCAACTATTTCAACCACCCTTTTGATCTTGAGCGTTGTGTTGAGGGGATCCGCGTAGCGACTAAGGTTGTGCAGTCAAAGCACTTCACAAACTACACTCTGTGTGACAGACAAACTACAGAGAAACTGCTTAACCTCAGTGTGAAGGCCAATGTCAACCTCATACCCAAGCACCTCAATGACACACAATCATTAGAGCAGTTCTGCAGAGACACTGTGATCACAATTTGGCACTACCATGGTGGTTGCCATGTGGGGAAGGTGGTTAACCCAGATTTCAAGGTTCTCAGAGTTGATAGACTCCGTGTGGTAGATGGCTCAACATTTAGAGAGTCACCAGGGACTAATCCTCAAGCCACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATTTTAAGAGATAGGTTGCGGAAATCGGCTGGTATATAA 1773 0.4664 MASVGAVKFLLCLVLWLSSSLSPCQGKQNWYKYRYPFIRRASSFSSSSSTSASASNNAYDYIIVGGGTAGCPLAATLSQKFSVLLLERGGVPFANPKVSFLENFHITLADTSPSSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSRFIQKVGWDPKLVNESYPWVEKQIVHRPKLAPWQRAVRDGLLDAGVSPFNGFTYDHVYGTKVGGTIFDRFSRRHTAAELLASANPQKLSVLIYATVQKIVFDTRGKRPRAVGVIFKDENGKQHHAVLGNHRQSEVIVSSGAIGSPQLLMLSGIGPKAELQNLNISVVLNNPFVGKGMADNPMNTIFVPSNRPVRQSLIETVGITKLGVYIEASSGFGQSNDSIHCHHGILSAEIGQLSTIPPKQRSPEAVKDFVKGKRELPIEAFRGGFILSKVANPWSTGELRLINTNVEDNPAVTFNYFNHPFDLERCVEGIRVATKVVQSKHFTNYTLCDRQTTEKLLNLSVKANVNLIPKHLNDTQSLEQFCRDTVITIWHYHGGCHVGKVVNPDFKVLRVDRLRVVDGSTFRESPGTNPQATVMMMGRYMGLKILRDRLRKSAGI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0417 590 Gene3D - 176 522 - -
Glsi07g0417 590 ProSitePatterns GMC oxidoreductases signature 2. 290 304 IPR000172 GO:0016614|GO:0050660
Glsi07g0417 590 SUPERFAMILY FAD/NAD(P)-binding domain 55 582 IPR036188 -
Glsi07g0417 590 Pfam GMC oxidoreductase 59 331 IPR000172 GO:0016614|GO:0050660
Glsi07g0417 590 Pfam GMC oxidoreductase 427 573 IPR007867 GO:0016614
Glsi07g0417 590 PANTHER OSJNBA0019K04.7 PROTEIN 20 584 - -
Glsi07g0417 590 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 529 - -
Glsi07g0417 590 PIRSF Alcohol_oxidase 37 589 IPR012132 GO:0050660
Glsi07g0417 590 Gene3D - 59 572 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0417 Glsi-ChrGlsi07 2981421 2987509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0417 40 583 Miscellaneous Gene Families AT5G51950 52.459 0.0 559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0374 06 3066155 3071953 Glsi07g0417 07 2981421 2987509 CCT