Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0374 ATGGGGTACACACAAAACAAGGCCAACCAGAGGAAGCCATTTAGAGGTTGGAAAGAAACAGCTTCTTCAGTGAGTGAGTGCTTTTCTGTGCCCTGTGAGATTCCGATGGCTTCAGTTGGTGCAGTCAAATTCTTGCTCTGCTTAGTTCTATGGCTCCTGAACTCTTCAACTCCTTGTCAAGGTAAGGAGGATTTCTATGGATATCGCTACCCCTTTATCAGAAGGGCAAGCTCATTTTCATCATTATCAATGTCAACTACCGCAAGAAATGATGGGTTTGACTACATAATAGTGGGAGGTGGCGCCGCAGGCTGCCCTCTGGCTGCAACCTTATCTCAAAAGTTCAGTGTTTTGCTGCTGGAAAGAGGGGGTGTCCCTTTTACCAATCCAAACATCTCGTTTCTAGAGAATTTTCACATTACCTTGGCGGACACTTCACCATCTTCACCTTCCCAATACTTTATTTCAACCGATGGAGTTCTTAATGCAAGGGCTAGGGTTCTTGGCGGCGGTACCTCCATTAATGCCGGCTTCTACACCAGAGCAAGCTCACGGTTTATACAGAAAGTGGGGTGGGATGCCAAGCTAGTAAACCAGTCTTACCCTTGGGTTGAGAACCAAATTGTGCACCGTCCAAACATTGCACCTTGGCAGAGAGCAGTGAGGGATGGCCTTCTGGATGTTGGTATTTCTCCTTTTAATGGGTTCACCTATGATCATGTCCATGGAACCAAGGTTGGTGGAACCATTTTTGACAGATTTGGCCGCCGCCACACTGCTGCTGAACTTCTTGCTTCTGGAAACCCTAAAAAACTTACTGTTTTGATCTATGCCACCGTCCAAAAGATTGTTTTTGATACAAGAGGAAAAAGGCCAAAAGCTATGGGAGTTATTTTCAAAGATGAAAAGGGGAAACGACATCAGGCAGTTCTGAGAAACAAGCAGAGTGAGGTGATTGTGTCTAGTGGGGCAATTGGGAGTCCTCAATTGCTAATGCTTAGTGGAATAGGGCCTAAAGCAGAACTCCAAAGCTTGAACATCCCAGTGGTGCTGGACAATCCATTTGTTGGGAAGGGCATGGCTGATAACCCCTTGAACACAATCTTTGTCCCTTCTAATAGGCGGGTTAAACAATCACTCATAGAAATTGTGGGTATCACCAACTCGGGTGTCTACATTGAAGCTAGCAGTGGGTTTGGTCAGTCCAGCGATAGCATTCACTGCCATCATGGTATCTTGTCAGCTGAGATTGGGCAGCTCTCCACAATTCCTCCCAGAAAAAGAACACCAGAAGCTGTTCAAGACTATGTCAAAGGAAAGCGAGAAATACCCGTTGAAGCATTCAGGGGAGGCTTCATCTTGTCAAAAGTAGCCAGTCCTTGGTCAACAGGTGAGCTCAGGTTGATCAATACCAATGTGGAGGACAACCCTGCTGTTACCTTCAACTACTTCGATCATCCACTTGATCTTCAGCGTTGTGTTGAGGGGATTCGCATAGCTACTAAGGTTGTCCACTCAGAGCACTTCACAAACTATACTACGTGTGACAGACAAACTACAGAGAAACTGCTTAACCTTACTGTGAAGGCTAATATCAACCTCGTACCCAAGCATGCCAATGACACAAAGTCACTAGAGCAGTTTTGCAGAGACACTGTGATCACAATCTGGCATTACCATGGTGGGTGCCATGTGGGGAAGGTGGTTAGCCCTGATTATAAGGTTCTTGGCGTTGACAGACTCCGTGTGATGGATGGCTCAACATTTACTGAGTCACCAGGGACTAATCCTCAAGGCACTGTGATGATGATGGGCAGGTACATGGGACTGAAGATTTTAAGAGATAGGTTGGGCAAATCAGCTGGTATATAA 1872 0.4599 MGYTQNKANQRKPFRGWKETASSVSECFSVPCEIPMASVGAVKFLLCLVLWLLNSSTPCQGKEDFYGYRYPFIRRASSFSSLSMSTTARNDGFDYIIVGGGAAGCPLAATLSQKFSVLLLERGGVPFTNPNISFLENFHITLADTSPSSPSQYFISTDGVLNARARVLGGGTSINAGFYTRASSRFIQKVGWDAKLVNQSYPWVENQIVHRPNIAPWQRAVRDGLLDVGISPFNGFTYDHVHGTKVGGTIFDRFGRRHTAAELLASGNPKKLTVLIYATVQKIVFDTRGKRPKAMGVIFKDEKGKRHQAVLRNKQSEVIVSSGAIGSPQLLMLSGIGPKAELQSLNIPVVLDNPFVGKGMADNPLNTIFVPSNRRVKQSLIEIVGITNSGVYIEASSGFGQSSDSIHCHHGILSAEIGQLSTIPPRKRTPEAVQDYVKGKREIPVEAFRGGFILSKVASPWSTGELRLINTNVEDNPAVTFNYFDHPLDLQRCVEGIRIATKVVHSEHFTNYTTCDRQTTEKLLNLTVKANINLVPKHANDTKSLEQFCRDTVITIWHYHGGCHVGKVVSPDYKVLGVDRLRVMDGSTFTESPGTNPQGTVMMMGRYMGLKILRDRLGKSAGI 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0374 623 SUPERFAMILY FAD/NAD(P)-binding domain 86 615 IPR036188 -
Glsi06g0374 623 ProSitePatterns GMC oxidoreductases signature 2. 323 337 IPR000172 GO:0016614|GO:0050660
Glsi06g0374 623 Pfam GMC oxidoreductase 460 606 IPR007867 GO:0016614
Glsi06g0374 623 PANTHER OSJNBA0019K04.7 PROTEIN 57 617 - -
Glsi06g0374 623 SUPERFAMILY FAD-linked reductases, C-terminal domain 360 562 - -
Glsi06g0374 623 Gene3D - 93 605 IPR036188 -
Glsi06g0374 623 Gene3D - 210 555 - -
Glsi06g0374 623 PIRSF Alcohol_oxidase 74 622 IPR012132 GO:0050660
Glsi06g0374 623 Pfam GMC oxidoreductase 93 364 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0374 Glsi-ChrGlsi06 3066155 3071953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g0374 93 616 Miscellaneous Gene Families AT5G51950 53.019 0.0 549
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0374 06 3066155 3071953 Glsi07g0417 07 2981421 2987509 CCT
Glsi06g0374 06 3066155 3071953 Glsi06g0374 06 3066155 3071953 ECH