Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0416 ATGGAAACAAGTGACAAATGTTGTTCGACTCAGCTTATTGATGGAGATGGTACATTCAATGTCGCTGGAATTGAACAATTTATGAAGGAGGTGAAACTTGGTGAATGTGGGCTTTCGTATGCTGTAGTTTCCATTATGGGTCCACAAAGCAGTGGTAAGAGCACCCTACTAAATCATTTGTTCAGAACTAACTTCAGGGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACTAAAGGAATTTGGATGGCTAAATGTGCTGGCATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGTGGAGAGGATGATACTGCATTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTGTCAGATATTGTGCTAATAAACATGTGGTGTCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCTCTTTTGAAAACTGTCTTTCAGGTCATGATGAGATTGTTTAGTCCACGTAAAACAACATTGATGTTTGTAATACGTGATAAAACAAGGACACCTCTTGAAAATTTAGAACCTGTTTTGCGCGAAGATATTCAGAAAATATGGGACTCTGTTCCTAAGCCACAGGCTCACATAGAAACCCCACTAAGTGAATTCTTCAATGTTGAAGTTGTTGCTCTTTCTAGTTATGAAGAAAAGGAAGAACAATTTAAGGAGCAGGTTGCCAACTTGAGGCAACGATTCTATCATTCTATTGCTCCCGGTGGGCTTGCAGGGGACAGACGTGGAGTAGTTCCTGCTTCAGGATTTTCTTTTAGTGCACAGCAGATTTGGAAAGTCATTAAGGAGAACAAGGACCTTGACCTTCCTGCCCATAAGGTCATGGTTGCTACTGTACGATGTGAAGAAATTGCCAATGAGAAATATGCTGCTTTTGCTGAAAATGAGGAATGGCGTCAGTTGGAAGATGCTGTGCAGTGTGGTCAAATTCCTGGATTTGGGAAAAAGCTCAGCTCAATCCTTGACGATTTTTTGTCAGGGTATGATGTGGAAGCCATTTATTTTGATGAAGGTGTCAGATCTGCAAAAAAAAAGCAGCTTCAAGAAAAACTGTTGCAACTTGTCCAACCAGCATTTCAATCTGCACTGGGACATATAAGGTCTGGAACTTTTGATAAGTTTAAGGAAGCGTTTGACAAGGCTTTGAATGGAGGGGAAGGGTTTTCTGCTGCTGCTAATAATTGCATTGGGTCTTGTATGGCTGAGTTTGACGAAGCATGTGCAGATGTTGTTATTGAGAAAGCAAACTGGGATACATCTAGAGTAAGGGAGAAACTGCAGCGAGACATTGATGCACATGTTGCTTCTGTGCGTGCAGCTAAGCTGTCCGAATTTACTTCGTCATATGAGGCAAAACTGAAGGAGGCCTTATCTGGACCTGTTGAAGCTCTTTTAGATGGAGCTAACAGTGATACTTGGCCAACAATAAGAAAACTTCTTAGGCGTGAAACTGAATCAGCCATTTCGGGGTTCTCTGCTGGACTCTCTGGGTATGATATGGATGAACAAACACGACAGAACATGATTGCGAGTTTAGAGGATTATGCAAGGGGGGTCATAGAAGCAAAGGCTAGGGAAGAAGCTGGAAGGGTTCTAATTCGTATGAAGGACAGGTTTGCAACATTATTCAGCCGGGATTCTGATTCAATGCCTCGTGTTTGGACCGGGAAGGAAGACATTCGAGCCATCACCAAGACTGCCCGCTCTGCTTCCTTGAAGTTGCTATCTGTTATGGCTGCAATTCGTTTGGATGATAAAGATGTTGATAATATTGAGAAAACATTAGCGGTTGCTTTGGTGGATTTATCATCAGGGAGTGCTGTTAATGATAAGAGCATCACAGTGGTTGATCCACTGGCTTCAAGCACTTGGGAACAGGTTCCATCCTCAAAAACATTGATCACACCTGTACAGTGCAAATCTTTGTGGAGGCAATTCAAGATGGAGACAGAGTATAGCGTCACTCAGGCCATATCTGCACAGGAGGCCAACAAGCGTAATAATAACTGGTTACCTCCTCCATGGGCAATTGTTGCTTTGGTTATTCTGGGATTTAACGAATTTATGACCCTTCTAAGAAATCCATTGTATTTGGGTGTCATCTTTGTCGGTTATCTTCTCATAAAAGCCCTATGGGTGCAGCTGGACATTTCTGGTGAATTCCGCAATGGAGCTCTTCCGGGGATTATATCCTTGTCTTCCAAGTTTCTTCCTACTGTCATGAACCTTGTCAGAAGACTAGCAGAGGAGGGACAGAACCCAGCAGCTAACGATCCTCAGAGAAACCCATCAAAAAGCAATAACAATGCTATTACTTCCAACTCTAGCGCTTCTAGTAATGTAACTTCTTTGGACAATGGGCCTGAATACTCCAGTCCATCAAAATATGAGTAG 2427 0.4265 METSDKCCSTQLIDGDGTFNVAGIEQFMKEVKLGECGLSYAVVSIMGPQSSGKSTLLNHLFRTNFREMDAFKGRSQTTKGIWMAKCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHIETPLSEFFNVEVVALSSYEEKEEQFKEQVANLRQRFYHSIAPGGLAGDRRGVVPASGFSFSAQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFAENEEWRQLEDAVQCGQIPGFGKKLSSILDDFLSGYDVEAIYFDEGVRSAKKKQLQEKLLQLVQPAFQSALGHIRSGTFDKFKEAFDKALNGGEGFSAAANNCIGSCMAEFDEACADVVIEKANWDTSRVREKLQRDIDAHVASVRAAKLSEFTSSYEAKLKEALSGPVEALLDGANSDTWPTIRKLLRRETESAISGFSAGLSGYDMDEQTRQNMIASLEDYARGVIEAKAREEAGRVLIRMKDRFATLFSRDSDSMPRVWTGKEDIRAITKTARSASLKLLSVMAAIRLDDKDVDNIEKTLAVALVDLSSGSAVNDKSITVVDPLASSTWEQVPSSKTLITPVQCKSLWRQFKMETEYSVTQAISAQEANKRNNNWLPPPWAIVALVILGFNEFMTLLRNPLYLGVIFVGYLLIKALWVQLDISGEFRNGALPGIISLSSKFLPTVMNLVRRLAEEGQNPAANDPQRNPSKSNNNAITSNSSASSNVTSLDNGPEYSSPSKYE 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0416 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 277 IPR027417 -
Glsi07g0416 808 Pfam Sey1 three-helix bundle domain 323 761 IPR046758 -
Glsi07g0416 808 Coils Coil 218 238 - -
Glsi07g0416 808 CDD GBP 36 242 - -
Glsi07g0416 808 Gene3D - 14 253 IPR027417 -
Glsi07g0416 808 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Glsi07g0416 808 MobiDBLite consensus disorder prediction 766 808 - -
Glsi07g0416 808 MobiDBLite consensus disorder prediction 763 808 - -
Glsi07g0416 808 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 18 273 - -
Glsi07g0416 808 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Glsi07g0416 808 Hamap Protein SEY1 [SEY1]. 9 766 IPR008803 -
Glsi07g0416 808 PANTHER PROTEIN SEY1 5 784 IPR008803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0416 Glsi-ChrGlsi07 2967799 2976805 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0373 06 3052721 3061777 Glsi07g0416 07 2967799 2976805 CCT