Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0349 ATGCTTTTTCACTCCTTCCTAGGCCCCTTCAACTCTAAGAGCGATCTCTCTGCCCCCTTTTGCTTGTTTTCTCTGATGGAGAGAAACCGATCCCACAGACAGGTTGCTGCTACGAAACAGTCCCTCTTCGATCAGGGCTATCTGGATGAACAATTTACCCAACTGGAGGAACTGCAGGATGATGCCAATCCTAACTTTGTGGAGGAGATTGTTACTCTTCACTACCGTGATTCATCCAGGCTTATTTCTAATATAGAGCAGGCAATGGAGAGGAACCCACTGGATTTTAACCAGCTGGATAGCATTATGCATCAGTTCAAAGGAAGCAGCTCAAGCATTGGAGCTAAAAAGGTGAAAGCAGAGTGCACTCTGTTTAGGGAATATTGCAGAGCAGGAAATGCAGAAGGATGCAGGAAGAGTTTCCAACAATTGAAGAGAGAATATGCTTTACTGAGAAAGAAACTAGAAGCTTATTTTCAGTTGGCTAGGCAAGCTGGGCCCTTGGAGACAGCGCGTCGCCCCAATTAA 528 0.4564 MLFHSFLGPFNSKSDLSAPFCLFSLMERNRSHRQVAATKQSLFDQGYLDEQFTQLEELQDDANPNFVEEIVTLHYRDSSRLISNIEQAMERNPLDFNQLDSIMHQFKGSSSSIGAKKVKAECTLFREYCRAGNAEGCRKSFQQLKREYALLRKKLEAYFQLARQAGPLETARRPN 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0349 175 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 63 158 IPR008207 GO:0000160
Glsi07g0349 175 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 32 167 IPR045871 GO:0000160|GO:0009927|GO:0043424
Glsi07g0349 175 Coils Coil 134 161 - -
Glsi07g0349 175 Pfam Hpt domain 75 152 IPR008207 GO:0000160
Glsi07g0349 175 FunFam Histidine-containing phosphotransfer protein 4 26 170 - -
Glsi07g0349 175 Gene3D HPT domain 22 170 IPR036641 GO:0000160
Glsi07g0349 175 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 32 164 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0349 Glsi-ChrGlsi07 2350044 2351491 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0311 06 2128545 2131724 Glsi07g0349 07 2350044 2351491 CCT
Glsi07g0349 07 2350044 2351491 Glsi06g0311 06 2128545 2131724 ECH
Glsi07g0349 07 2350044 2351491 Glsi07g0349 07 2350044 2351491 ECH