Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0311 ATGGCATCCCGCCGGCAGGTTGCTGCCGTGAAACAATCCCTCTTTGATCAGGGATATCTGGATGAACAGTTCATCCAACTGGAGGAACTGCAGGATGATGCTAATCCTAACTTTGTTGAAGAAATTGTCACCCTTTACTACCGCGATTCATCCAGACTTATCTCAAACATGGAGCAGACACTGGAGAGGAACCCACTGGAATTTAACAGGCTGGATACTATTATGCATCAATTCAAAGGAAGCAGCTCAAGCATTGGAGCAAAAAAAGTGAAAGCAGAGTGCACTCGGTTTAGGGAATATTGCAGGGCTGGAAATGCAGAAGGATGCAAGAAGAGCTTCCAACAATTGAAGAAAGAACATGCTGCACTGAGAAAGAAACTTGAAGCTTATTTTCAGCTAGTTAGGCAAGCTGGGCCCCTGGATTCAGCAGAAAGTAGATATTCACCTGAGAAAAAGAGAAAGGCTCTAGTGGGATTGGGATATTTAGCTTCCAAATGTCAGCCGATTGACTTGACCCCTGATCAACTCCAGTTGGGTCTGTTTTAA 546 0.4451 MASRRQVAAVKQSLFDQGYLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISNMEQTLERNPLEFNRLDTIMHQFKGSSSSIGAKKVKAECTRFREYCRAGNAEGCKKSFQQLKKEHAALRKKLEAYFQLVRQAGPLDSAESRYSPEKKRKALVGLGYLASKCQPIDLTPDQLQLGLF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0311 181 FunFam Histidine-containing phosphotransfer protein 4 1 142 - -
Glsi06g0311 181 Coils Coil 106 133 - -
Glsi06g0311 181 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 35 130 IPR008207 GO:0000160
Glsi06g0311 181 Pfam Hpt domain 41 124 IPR008207 GO:0000160
Glsi06g0311 181 Gene3D HPT domain 1 142 IPR036641 GO:0000160
Glsi06g0311 181 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 2 139 IPR045871 GO:0000160|GO:0009927|GO:0043424
Glsi06g0311 181 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 4 136 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0311 Glsi-ChrGlsi06 2128545 2131724 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0311 06 2128545 2131724 Glsi07g0349 07 2350044 2351491 CCT
Glsi07g0349 07 2350044 2351491 Glsi06g0311 06 2128545 2131724 ECH
Glsi06g0311 06 2128545 2131724 Glsi06g0311 06 2128545 2131724 ECH