Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0342 ATGGAAAGCAATGTACCAGTACTAGCAAAGAGAGTGTGGAGCATAGTACGTGTGATGCTGTTCATGTTGAGAAAAGGAATACCAAAGGGCAAACTCATGATGGATCTCAACATGATGCTCAAACGCCGCGGCAAGCTCGCCGGAAAAGCCATCACCAATCTCATGTTCCACCACCACCACCACCGCCACCACGGTGGCTCCACCTCATCCCATGACTCACACGGCCAACAGTTCTCCGCCTCACGCGAGTACGAATTCAGCTGCAGCAACACCCCCAACTACTTCTTCCCCATCATTGGCAAGCGCAACCGCCACAGCCACTTCTTCTCGTGTGCTCAGGAGCCACTCACACAGGACGATGACATGGTCACAGTCAATGCATTGAAGGCGGCGTTGGAGATGCTAGAAAATAATAAGGCTGTGGTGGAGGCATCCCCGGCGCTTCCGGGGTTCGGGCGGAGCCCTATGGTGAGGCAGCTGAGGGTGACAGATTCCCCCTTCCCACTACAAGACGGGAACGAGGATAAGGACCACCTGGTGGACAAGGCGGCAGAAGACTTCATAAAGAGGTTTTACAAGGAATTAAGGAAGCAGGATTGA 600 0.535 MESNVPVLAKRVWSIVRVMLFMLRKGIPKGKLMMDLNMMLKRRGKLAGKAITNLMFHHHHHRHHGGSTSSHDSHGQQFSASREYEFSCSNTPNYFFPIIGKRNRHSHFFSCAQEPLTQDDDMVTVNALKAALEMLENNKAVVEASPALPGFGRSPMVRQLRVTDSPFPLQDGNEDKDHLVDKAAEDFIKRFYKELRKQD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0342 199 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 4 198 - -
Glsi07g0342 199 Pfam Cotton fibre expressed protein 180 198 IPR008480 -
Glsi07g0342 199 Coils Coil 125 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0342 Glsi-ChrGlsi07 2283903 2284502 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0304 06 2064894 2065490 Glsi07g0342 07 2283903 2284502 CCT
Glsi07g0342 07 2283903 2284502 Glsi06g0304 06 2064894 2065490 ECH
Glsi01g2298 01 85780655 85781323 Glsi07g0342 07 2283903 2284502 ECH
Glsi07g0342 07 2283903 2284502 Glsi07g0342 07 2283903 2284502 ECH