Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g2298 ATGGAAATGGAGGCGCGTCCAGCGGTGCCGGTGGTAGCAAACAAGGTATGGAAAATAGTACGTGTATTGCTGTTCATGTTGAAAAAGGGAATAGCCAAGAGCAAAATAATGGTGGAGCTCCATTTGTTGGTGAAACGTGGGAAGCTAGCCGGCAAGGCCTTCGCCAACAGCCTTATGCTCCTCCACCACCACCACTACGCCGCCTTCACCTGCCGCTCCCACGACTCCCACCTCTCCTTCATTTCTCCCCGTGAATACGAATTCAGCTGCAACAACAGCCCCGCCTTCCCCGCCTTCCACGCCATCATTAATAGCAAACGCAAACCCCACCACTTTCCCCGTTTCTCCAAATCATACCACCAATACGACGACGTCTCCACTGTCCATGCAGCTCAGAAGGTGCTGGTTGACATGTTGAACCATGAAAAGCTTGACCCTAATTACTCGCCCTCCGTCACATTGCCTGGCTTTGGGAAGAGCCCTATTGGGAGGCAACTCAGAATCACTGACTCGCCCTTCCCCTTGAAGGACGATGAAGGGGATCAGGATCATGCCCAAGTGGACATGGCAGCGGAGGAATTCATTACCAAGTTCTACAAAGATCTCAACTTGCAAAAAACAATGGCTGCTCTTAACACACCTTACCATGATTACTCGTGGGGCAGATGA 669 0.5142 MEMEARPAVPVVANKVWKIVRVLLFMLKKGIAKSKIMVELHLLVKRGKLAGKAFANSLMLLHHHHYAAFTCRSHDSHLSFISPREYEFSCNNSPAFPAFHAIINSKRKPHHFPRFSKSYHQYDDVSTVHAAQKVLVDMLNHEKLDPNYSPSVTLPGFGKSPIGRQLRITDSPFPLKDDEGDQDHAQVDMAAEEFITKFYKDLNLQKTMAALNTPYHDYSWGR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g2298 222 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 7 213 - -
Glsi01g2298 222 Pfam Cotton fibre expressed protein 185 210 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g2298 Glsi-ChrGlsi01 85780655 85781323 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g2298 01 85780655 85781323 Glsi07g0342 07 2283903 2284502 ECH
Glsi01g2298 01 85780655 85781323 Glsi06g0304 06 2064894 2065490 ECH
Glsi01g2298 01 85780655 85781323 Glsi01g2298 01 85780655 85781323 ECH