Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0260 ATGGAGCTGATTTCGGGACTACCGGACGATGTAGCCAGGGACTGTTTGATTCGGGTTTCCTATCAGCAGTTCCCACTTGTTGCATCGGTGTGCAAGGTCTGGAAGACGGAGCTTGAGATGCTGGACTTTCGTCGTCGAAGGAGGACAGCAGGGCATAGCCAGAAAATCGTTGTAATGGTTCAGGCACGAGTTGACTCGGAGAAACGTGTTAGTGGCCTGATGAAGGGTTCCATGAACCCGATTTACCGTCTCAGTATTTATAAGACGGAAACGGGTAATTGGAGCGAGTTGCCACCGCCTCCGGGACTAACTGGCGGGTTACCGATGTTCTCTCAGTTAGTGGGTGTCGGGTACGATTTGGTGATGATGGGCGGGTGGGACCCGGACTCGTGGAAATCTTCGAATTCGGTTTTTATCTACAATTTCATGTCGGCTAAATGGCGACGCGGGGCCGATATGCCAGGACCCAGGACGTTCTTCGCATGCGCGTCTGATTCCGAACGGATGGTGTTCGTCGCCGGTGGGCACGACGACGAGAAGAATGCGCTGAGGTCGGCGTTTGTGTATGACGTGGCAAGGGATGAGTGGGTCCCACTTCCTGACATGGAAAGGGAGAGGGATGAGTGCAGTGCAACTTTCCACGGTGGAAAGTTTCATGTTATTGGCGGTTACTGTACGGAGAAGCAAGGGCAGTTCGAGAGAAGCGCCGAAGCCTTCGATGTTGCCACGTGGAGATGGGACCAAGTTGAAGAGTACTTCTTGGCAAGTGCCACTTGTCCGAGGACCTGCGTGGTCGATGATGATGAGAAAATATACATGTGCAGGGGTGGTGACGTGGTAGTATTGCAGGATTCGACGTGGCAAGAAATAGCCAAACTGCCAGGTGAGATATGGGAGGTGGCATACATGAGAGCGTGGGAAGGGACGTTGTTGTTGATTGGATCCAGCGGATATAGCGAACCGCACATGGGCTTTCTATTGGATCTTAAAAATAACTCTTGGAGAAAATTGGAGAGCCCAATGAGCTATACGGGTTACGTTCAGTCAGGTTGTCTCTTGGAGGTTTAG 1068 0.5197 MELISGLPDDVARDCLIRVSYQQFPLVASVCKVWKTELEMLDFRRRRRTAGHSQKIVVMVQARVDSEKRVSGLMKGSMNPIYRLSIYKTETGNWSELPPPPGLTGGLPMFSQLVGVGYDLVMMGGWDPDSWKSSNSVFIYNFMSAKWRRGADMPGPRTFFACASDSERMVFVAGGHDDEKNALRSAFVYDVARDEWVPLPDMERERDECSATFHGGKFHVIGGYCTEKQGQFERSAEAFDVATWRWDQVEEYFLASATCPRTCVVDDDEKIYMCRGGDVVVLQDSTWQEIAKLPGEIWEVAYMRAWEGTLLLIGSSGYSEPHMGFLLDLKNNSWRKLESPMSYTGYVQSGCLLEV 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0260 355 SMART kelc_smart 119 167 IPR006652 GO:0005515
Glsi07g0260 355 SMART kelc_smart 169 216 IPR006652 GO:0005515
Glsi07g0260 355 CDD F-box_AtAFR-like 3 47 - -
Glsi07g0260 355 Pfam Kelch motif 108 157 - -
Glsi07g0260 355 PANTHER OS02G0208700 PROTEIN 2 355 IPR044595 GO:0080037|GO:2000762
Glsi07g0260 355 Gene3D - 42 352 IPR015915 GO:0005515
Glsi07g0260 355 SUPERFAMILY Kelch motif 80 340 IPR015915 GO:0005515
Glsi07g0260 355 Pfam Kelch motif 170 202 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0260 Glsi-ChrGlsi07 1719677 1720744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0260 7 196 Miscellaneous Gene Families AT4G33900 25.243 1.92e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0218 06 1480535 1481611 Glsi07g0260 07 1719677 1720744 CCT
Glsi07g0260 07 1719677 1720744 Glsi07g0260 07 1719677 1720744 ECH