Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0257 ATGGGTGCTTCTCTGCCCCCTAAGGAGGCCAACCTCTTCAAGCTTATTGTTAAATCATATGAAACCAAACAATACAAAAAGGGCCTCAAAGCAGCTGATGCCATCTTAAAAAAATTTCCAGACCATGGAGAAACTTTATCAATGAAGGGGTTGACGTTGAATTGCATGGATCGTAAGTCTGATGCATATGAACTTGTTCGTCAAGGACTAAAGAATGACCTTAAAAGTCATGTTTGCTGGCATGTTTATGGTCTCCTTTATCGGTCGGACAGAGAATATAGGGAGGCGATTAAGTGCTACCGGAATGCACTGAAAATAGATCCTGACAATATTGAAATCCTACGAGACTTATCACTTTTACAGGCTCAAATGCGAGATTTAATTGGCTTTGTTGAGACAAGACAACAACTTCTGACTCTTAAGCCAAATCATCGCATGAACTGGATTGGCTTTGCTGTTGCCCATCATTTGAACTCTAATGCATCCAAGGCAGTTGAAATTCTGGAAGCATATGAGGGGACATTAGATGATGATTATCCTCCAGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTATATAAGATCTCTTTGTTCGAAGAATGCGGATTTCTTGAGAGAGCTCTTGAGGAGTTGCACAAAAAAGAATCAAAAATTGTTGATAAGCTTGCATATAAAGAGCAAGAGGTTTCACTTGTAGTGAAGCTTGGTCACTTAGAAGAAGGCGAAAAATTGTATCGGGCACTACTTTCCATGAATCCTGACAATTATAGATATTATGAAGGCCTCCAAAAGTGTGTTGGGTTATATTCAGAAAATGGCACTTATTCTCTAGATGAAATAGATCGGTTAGATGCTTTGTACAAATCACTTGAGCAGCAATATAAGTGGTCTTCTGCTGTCAAGAGAATACCACTTGATTTTCTGCAAGGTGACAATTTTCAAGAAGCAGCTGAAAATTATATTAGACCTCTCCTAACTAAGGGAGTTCCATCTCTGTTCTCTGATCTTTCTTCTTTGTACAATCACCCTGGGAAGGCAGACATCTTGGAGCAACTTATTCTGGAGTTAGATCATTCAATTAGGACAACTGGTCAATACCCTGGAAGGGTGGACAAAGAGCCCCCTTCAACTCTGATGTGGACTTTGTTTTTATTGGCTCAGCATTATGACAAGCGAGGCCAATATGAAATTGCTCTTTCTAAAATTGACGAGGCTATAGAACACACACCTACTGTCATTGATCTGTATTCTGTCAAGAGTCGAATAATGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCGCTTGCAGATGAAGCTAGGTGTATGGATCTTGCAGATCGATATATCAATAGTGAATGTGTTAAGCGTATGCTGCAGGCTGATAAGGTTGCTTTGGCAGAAAAAACTGCTGTCTTGTTCACAAAAGATGGGGATCAACACAACAACCTCCATGATATGCAGTGCATGTGGTATGAGCTAGCCTCTGGTGAAAGCTATTTCCGCCAGGGTGATCTTGGACGAGCTCTCAAGAAATTTTTAGCGGTGGAGAAGCATTATGCAGATATTACTGAAGACCAATTTGATTTCCATTCATACTGCTTAAGGAAAATGACTTTGCGAACATATGTGGAAATGCTTAGATTTCAAGACCGATTGCATTCACATGCATATTTTCATAAAGCAGCGGCTGGAGCTATCCGATGTTACCTGAAATTGTATGATTCTCCTTCAAAGTCTACAGCTGAGGAAGATGATGACATGTCAAAGTTGCTTCCTTCTCAGAAAAAGAAATTGAGGCAAAAACAAAGAAAGGCAGAAGCACGGGCTAAGAAAGAGGCAGAAGAAAAAAATGAAGAGTCAAGTGCTGGCAGTGTGTCAAAGTCTGGAAAAAGGCATTTGAAACCTGTTGATCCAGATCCACGTGGTGAAAAACTATTGCAGGTTGAAGATCCACTGCTAGAAGCCACAAAATATCTAAAGTTGCTGCAGAAGAACTCACCTGATTCACTGGAGACACACTTGCTCTCTTTTGCATTGTATATCAGAAAACAAAAGGTTTTGCTTGCCTTTCAGGCTGTAAAGCAGTTACTGAGGTTGGATGATGAACACCCTGATTCTCATCGTTGCTTGATTAAATTCTTTCATAAAGTGGGATCCATGAAAGTTCCTGTGACTGACAGCGAGAAACTCATTTGGAGTGTCTTAGAAGCGGAGCGCCCAAATATTAGTCATTTGCATGAGAAATCTCTGTTTGAGGCAAATAACTCTTACCTTGAAAAACATAAAGATTCTTTGATGCACAGAGCTGCTGCTGCAGAAATTATGTACATTTTGGATCCCAACAGAAAGTCCGAGGCTGTCAAGTTGATTGAAGAGTCACTAAATGTTGTTGTGCCAAGAAATGGAGCACCAGGACCAATTAGGGAATGGCAACTCAATGATTGTATTGCGGTTCATAAACTTCTTGGAACAGTCCTTGTTGACCCGGATGCAGCATTGAGATGGAAAGTGCGTTGCGCGGAGTTTTTCCCATATTCTACGTACTTTGAGGGCAGCCGCAGTTCTGCCTCTCCCAACTCAGTCTTCAACCAGAAATGTAATAATTTTGAAAATGGGAGTCCTAACCATTCAGTGGGTGGTCAAAATGTTGACTCCTTCACATCAAATGGAAAACTAGAGGCATTTAAAGATCTCACCATCTGA 2706 0.4084 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSDAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLIGFVETRQQLLTLKPNHRMNWIGFAVAHHLNSNASKAVEILEAYEGTLDDDYPPENERCEHGEMLLYKISLFEECGFLERALEELHKKESKIVDKLAYKEQEVSLVVKLGHLEEGEKLYRALLSMNPDNYRYYEGLQKCVGLYSENGTYSLDEIDRLDALYKSLEQQYKWSSAVKRIPLDFLQGDNFQEAAENYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELDHSIRTTGQYPGRVDKEPPSTLMWTLFLLAQHYDKRGQYEIALSKIDEAIEHTPTVIDLYSVKSRIMKHAGDLVAAAALADEARCMDLADRYINSECVKRMLQADKVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLRFQDRLHSHAYFHKAAAGAIRCYLKLYDSPSKSTAEEDDDMSKLLPSQKKKLRQKQRKAEARAKKEAEEKNEESSAGSVSKSGKRHLKPVDPDPRGEKLLQVEDPLLEATKYLKLLQKNSPDSLETHLLSFALYIRKQKVLLAFQAVKQLLRLDDEHPDSHRCLIKFFHKVGSMKVPVTDSEKLIWSVLEAERPNISHLHEKSLFEANNSYLEKHKDSLMHRAAAAEIMYILDPNRKSEAVKLIEESLNVVVPRNGAPGPIREWQLNDCIAVHKLLGTVLVDPDAALRWKVRCAEFFPYSTYFEGSRSSASPNSVFNQKCNNFENGSPNHSVGGQNVDSFTSNGKLEAFKDLTI 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0257 901 PIRSF NAT_A 1 818 IPR021183 -
Glsi07g0257 901 SUPERFAMILY TPR-like 381 707 IPR011990 GO:0005515
Glsi07g0257 901 FunFam N-terminal acetyltransferase A, auxiliary subunit 2 503 - -
Glsi07g0257 901 SMART tpr_5 380 413 IPR019734 GO:0005515
Glsi07g0257 901 SMART tpr_5 77 110 IPR019734 GO:0005515
Glsi07g0257 901 SMART tpr_5 43 76 IPR019734 GO:0005515
Glsi07g0257 901 MobiDBLite consensus disorder prediction 580 594 - -
Glsi07g0257 901 MobiDBLite consensus disorder prediction 580 646 - -
Glsi07g0257 901 Gene3D - 505 725 - -
Glsi07g0257 901 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Glsi07g0257 901 FunFam N-terminal acetyltransferase catalytic subunit (NAT1) 505 725 - -
Glsi07g0257 901 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 1 826 - -
Glsi07g0257 901 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Glsi07g0257 901 MobiDBLite consensus disorder prediction 606 622 - -
Glsi07g0257 901 Coils Coil 596 620 - -
Glsi07g0257 901 Pfam TPR repeat 84 123 - -
Glsi07g0257 901 SUPERFAMILY TPR-like 13 124 IPR011990 GO:0005515
Glsi07g0257 901 MobiDBLite consensus disorder prediction 631 646 - -
Glsi07g0257 901 SUPERFAMILY TPR-like 75 263 IPR011990 GO:0005515
Glsi07g0257 901 Gene3D - 2 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0257 Glsi-ChrGlsi07 1683594 1705858 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0215 06 1443627 1463204 Glsi07g0257 07 1683594 1705858 CCT
Glsi07g0257 07 1683594 1705858 Glsi07g0257 07 1683594 1705858 ECH