Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0231 ATGGTCTGTTTCAAGTCCCTTTCAGGTTTCAAGGGAGTTATAATTACTTTTGTTCTTCATACAGAGCGATATGAGCAATTTGGTCTAGACTACACACTAGCCAGAACAGCTGCCAAAGCGAACGACTACCCGAGCTTAATTGTCACTCAAATGAAGAAGCCATCCAACCCAGAACCCATCACTTTCCCAGCAAAGTCTCCATCTCAATTATCCTCCGAATGCTGGTTCGATGATGCATGCATCCTCGACATGGACTACTTCGTCAAAACCCTTTCAGGCATCAAAGCAAAAGGCGTGCGTGCTGACTTAATTGGTTCCATAATCACACACTACGCCTCCAAATGGCTCCCGGACCTTTCTGCGGGTGACATCCCCGAAAAGGGCCTAACTCAATTCGAAGAATCACCTGAAAGTGTCACAGCTTTGTGGATGAAGAAGAGGTTCTTTGTCGAAACCTTAGTGGGTGTTCTGCCTCCTGAGAAGGATTCCATACCGTGCAACTTCCTCCTTCGCCTTCTCAGAACAGCCAACATGGTTGGGGTTGAGTCCAGTTACAAATCAGAGCTTGAGAAGCGTATTTCATGGCAGTTAGACCAAGCTTCATTGAAAGAGATAATAATACCCTCTTTCAGTCACACTTGTGAGACTCTGTTAGATGTTGAGCTGGTCATTAGGTTGGTTAAGAGGTTCGTGAGTTTGGATAGTGACGGTGCTAAAACTGGGGCTGCTTTAGTTAAGGTGGCGAAATTGGTTGATTGCTACCTCGCTGAGGCTGCTGTGGATGCCAATTTGAGCTTGTCTGAGTTCGTCACGCTTGCTGGAGCTCTTCCTACCCATGCAAGAGCCACAGACGACGGACTGTACAGAGCCATTGACACTTATCTTAAAGCACATCCAGGGGTATCGAAGCAAGAAAGGAAAGGTCTCTGTAGGCTGATTGATTGCCGGAAACTAACCCCTGAAGCCTCACTTCATGCAGCTCAAAATGAACGCTTGCCTGTCAGAGCTGTGATTCAGGTGCTCTTCTCTGAGCAAACCAAGCTCAATCGCCACATAGATTGGAGTGGTTCCTTCAGTGGCACGAGAAGCCCAAATGGTGGGTTCGACTTGCCAGCTCGGTCTCTTTCAAAGCGTGAGATGTATGCTCAGCAAATGGAGATAAGGAAGCTGAAAGAAGATGTTTACAGGCTTCAAAGCCATTGCAGTGCCATGCAAATGCAGATGGAGAGGGTGATGGAGAAGAAGAAGGGGTTCTTCAAATGGAAGAAGTTTGGGATGCCAATGTTTACTAAAAGTGCGACTGCGGTTGATAAAATCGTTATCGAAGAAGGGGTTGAAGGGGACGGTGGGTTTGGAAGACAAACGCCTATGGACATGAAAACCAGGCTTGTCAAAGCTCGGACACCTCACAAGTGGAGGAAATCTCTGTCCTGA 1434 0.4714 MVCFKSLSGFKGVIITFVLHTERYEQFGLDYTLARTAAKANDYPSLIVTQMKKPSNPEPITFPAKSPSQLSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIITHYASKWLPDLSAGDIPEKGLTQFEESPESVTALWMKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVESSYKSELEKRISWQLDQASLKEIIIPSFSHTCETLLDVELVIRLVKRFVSLDSDGAKTGAALVKVAKLVDCYLAEAAVDANLSLSEFVTLAGALPTHARATDDGLYRAIDTYLKAHPGVSKQERKGLCRLIDCRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHIDWSGSFSGTRSPNGGFDLPARSLSKREMYAQQMEIRKLKEDVYRLQSHCSAMQMQMERVMEKKKGFFKWKKFGMPMFTKSATAVDKIVIEEGVEGDGGFGRQTPMDMKTRLVKARTPHKWRKSLS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0231 477 Pfam NPH3 family 74 323 IPR027356 -
Glsi07g0231 477 PANTHER OS12G0117600 PROTEIN 55 414 IPR043454 -
Glsi07g0231 477 ProSiteProfiles NPH3 domain profile. 73 347 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0231 Glsi-ChrGlsi07 1465950 1468609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0231 72 348 EF-hand Containing Proteins AT3G44820 36.842 1.48e-52 186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0198 06 1334811 1338073 Glsi07g0231 07 1465950 1468609 CCT
Glsi07g0231 07 1465950 1468609 Glsi07g0231 07 1465950 1468609 ECH