Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0176 ATGTCTGCAGCAGTGTGTGGAAGCAAGAGATCTTTCTTTGAAGACCTTCCTCCATCACCCCCAGTATCCAAGAGGCTTCGTTGTTCACCCTCAACATCGCCGATTCGTTTCCCGGCTCCGAGTCTCATCGATCAGCTTCGGGCTTTGTTTCCTGACATGGAAGTCCAGGAACTTGAGAGCGCCCTCCAAGAATGTGGCAATGATCTAGATGCTGCCATCGAGAGGCTACATGAGCTTTGCTTGGGATCTGCTGATGAAAATTGTGTAACTGCTAAAGAATCAGAAGTTAATGCTGAGACAGTTACATGGAAAGATGATGTGGATGCTTCTCCTTCCGAGAATAAGTTGGCTTCAAACAACCTTCCTGCAGATGGAGCAGAATGGGTTGACCTGTTGGTGAGAGAAACTATAAGTGCTACTAGTTTTGATGTTGCCAGAGCCCGTGTTGCTAGAATTCTGGAGGTATTAGCAAAATTAATCAGTGAACGTGCAAGTGCCGAGGCAACACATGTTATTCAGAAGGAAAATGTGGGGCTGAAAGTGCAAAAGGAGGGGGTGATTAAGGAGAACACAATTCTTAAGCAAGCAGTGAAAATCCAGCATGAACGACTTTCTGAATATGAGAATAAGAACCAAGAGGTGCAGCTTTTGAAGCAGATGGTGTCTCAATACCAGGAGCGGTTAAGAACTCTTGAGGTGGAGAACTATGGTTTGGTGATGCATTTGAAGCAGGCTCAACAGTGCAACTCCTTTCCTGGGCATTTCCCTCCTGATGTATACTAA 783 0.4572 MSAAVCGSKRSFFEDLPPSPPVSKRLRCSPSTSPIRFPAPSLIDQLRALFPDMEVQELESALQECGNDLDAAIERLHELCLGSADENCVTAKESEVNAETVTWKDDVDASPSENKLASNNLPADGAEWVDLLVRETISATSFDVARARVARILEVLAKLISERASAEATHVIQKENVGLKVQKEGVIKENTILKQAVKIQHERLSEYENKNQEVQLLKQMVSQYQERLRTLEVENYGLVMHLKQAQQCNSFPGHFPPDVY 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0176 260 CDD CUE 41 76 - -
Glsi07g0176 260 Coils Coil 207 234 - -
Glsi07g0176 260 Gene3D - 36 84 - -
Glsi07g0176 260 SUPERFAMILY UBA-like 41 83 IPR009060 GO:0005515
Glsi07g0176 260 Coils Coil 55 75 - -
Glsi07g0176 260 Pfam CUE domain 41 76 IPR003892 GO:0043130
Glsi07g0176 260 ProSiteProfiles CUE domain profile. 38 84 IPR003892 GO:0043130
Glsi07g0176 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0176 Glsi-ChrGlsi07 1164635 1169866 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0143 06 1044162 1047909 Glsi07g0176 07 1164635 1169866 CCT
Glsi07g0176 07 1164635 1169866 Glsi07g0176 07 1164635 1169866 ECH