Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g0143 ATGATGTCTGCTGCGGTGTGTGGAAGCAAGAGATCTTTCTTTGAAGATCTTCCTCCATCACCTCCTGTGTCCAAGAGGTTCCGTTGCTCATCGTCCACCTCGCCAATTCGTTTCTCGGCTCCGAGTCTCATCGATCAGCTTCGGGCTGTGTTTCCTCGCATGGAAGTCCAGCTTTTTGAGAGAGCACTCCAAGAATGTGGCAATGATCTAGATGCTGCCATCAATAGCTTGCATGAGCTTTGCTTGGGATCTGCTGATGAAAATTCTGTTACTGCTGAAGAATCAGACGCTAATGTGGAAACAGGTACCTTGAAAGATGATGGGTATGCTTCTGCTTCCGAGAATCAGTCAGCTTCGAACAACCTTCCTGCAGATGGAGCAGAATGGGTTGACTTGTTTGTGAGGGAAATTATGACTGCTAATAGTTTTGATGCTGCCAGAATCCGTGCTGCTAGAATGCTGGAGGTTCTGGAGAAATCAATCGGTGGTCGTGCAAGTGCCGAGGTTACACGTGTTATTCAAAGGGAAAATATGATTTTGAAAGAGCAAATGGAAGGACTGACTAGGGAGAATACTATTTTAAAAAGTGCTTTTAAAATCCAGCATGAACGTCAGAATGAGTATGAAAGTAAGAACCAAGAGTTGCAGCATTTGAAGCAGTCCGTATCTCAATACCAGGAGCAATTGAGAACTCTTGAGTTGAGGAACTATGCTTTGGCAATGCATCTGAAGCAGGCTCAACAGTGCAACTCCTTTCCTGGGCGTTACCATCCTGATGTCTTCTAA 786 0.4517 MMSAAVCGSKRSFFEDLPPSPPVSKRFRCSSSTSPIRFSAPSLIDQLRAVFPRMEVQLFERALQECGNDLDAAINSLHELCLGSADENSVTAEESDANVETGTLKDDGYASASENQSASNNLPADGAEWVDLFVREIMTANSFDAARIRAARMLEVLEKSIGGRASAEVTRVIQRENMILKEQMEGLTRENTILKSAFKIQHERQNEYESKNQELQHLKQSVSQYQEQLRTLELRNYALAMHLKQAQQCNSFPGRYHPDVF 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g0143 261 Gene3D - 39 83 - -
Glsi06g0143 261 MobiDBLite consensus disorder prediction 91 121 - -
Glsi06g0143 261 ProSiteProfiles CUE domain profile. 39 85 IPR003892 GO:0043130
Glsi06g0143 261 CDD CUE 42 77 - -
Glsi06g0143 261 SUPERFAMILY UBA-like 42 84 IPR009060 GO:0005515
Glsi06g0143 261 Coils Coil 208 235 - -
Glsi06g0143 261 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 2 261 - -
Glsi06g0143 261 Pfam CUE domain 42 77 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g0143 Glsi-ChrGlsi06 1044162 1047909 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0143 06 1044162 1047909 Glsi07g0176 07 1164635 1169866 CCT
Glsi06g0143 06 1044162 1047909 Glsi06g0143 06 1044162 1047909 ECH