Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi06g1620 ATGTATGCTGATCGGGTGGAAACTGGAACGAGGAGGTCAGTAAAGGAACGTCTTAATGGGAATTTTGTCGGTGACTCCACCCGGCAACGGCAAATCACCGGAAAGAGGCAGAGGCAAGATGACAAGTGGGAACATGATCTCTTTGATGATGAGGAACCACGAATTTCTAATCGCAAAGTCAATGGTCAAGATCTTCGACTGAAGCTTCAAAAGAGAGGTCTTCAACCATCAGTTCAGATTGGAAAGAGTGCTGCTGCACCAGGTGTGTGGGATCTACGCGAAAGGCTATCAGGGACAATGATCCCACAGCCTAAGAATTCTGACCCACCAAAATCAAAAGTGGAAATTGTTAAACCAGGCAGTAAAACTTTCAGTGTTGAGGCTCCTGCATCACAGATCAAAAGAGCAGTCAACCCAGCTCCTAAAAGAAAGGCATCACAAAAGGCTGTTACTTCAGTGGATGATTTTTTGCAGTCCTTGGGTCTTGAGAAGTATCTTATAGCCTTTCAAGCTGAAGAAGTTGATATGACAGCCCTTACGCACATGACTGATGATGATTTTAAGGCTATGGGTATACCAATGGGGCCAAGAAAGAAGATACTTTTAGCGTTGGAATCAAAAGGCTAA 627 0.4434 MYADRVETGTRRSVKERLNGNFVGDSTRQRQITGKRQRQDDKWEHDLFDDEEPRISNRKVNGQDLRLKLQKRGLQPSVQIGKSAAAPGVWDLRERLSGTMIPQPKNSDPPKSKVEIVKPGSKTFSVEAPASQIKRAVNPAPKRKASQKAVTSVDDFLQSLGLEKYLIAFQAEEVDMTALTHMTDDDFKAMGIPMGPRKKILLALESKG 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi06g1620 208 Gene3D - 150 208 IPR013761 -
Glsi06g1620 208 CDD SAM_superfamily 152 205 - -
Glsi06g1620 208 SUPERFAMILY SAM/Pointed domain 148 205 IPR013761 -
Glsi06g1620 208 PANTHER SCP160 101 204 - -
Glsi06g1620 208 FunFam Sterile alpha motif domain-containing protein 150 208 - -
Glsi06g1620 208 SMART SAM_4 145 208 IPR001660 GO:0005515
Glsi06g1620 208 Pfam SAM domain (Sterile alpha motif) 147 205 IPR001660 GO:0005515
Glsi06g1620 208 MobiDBLite consensus disorder prediction 1 41 - -
Glsi06g1620 208 ProSiteProfiles SAM domain profile. 148 202 IPR001660 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi06g1620 Glsi-ChrGlsi06 62109908 62120044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi06g1620 37 207 Glycosyltransferase AT3G07170 61.988 1.41e-64 196
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1620 06 62109908 62120044 Glsi07g1678 07 55589599 55602255 CCT