Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g1377 ATGGCATACGAATTCAGTAGTGAACCCTTGTTATTCATCTTCCTCCTCTCCCTATCATCTTCCATCTCCCTTTGTCTACTTTCTGAGGCCTGTCACGCTGTGGACAAAGAGGCATTACTTGATTTCAAGAGCAAGATCAGCTCTGACCCTTCCAGTCTTCTTCGTTCATGGACATCTTCCTCGGACTGCTGCCATGATTGGGAAGGCATCACGTGTGATTCCACAGGCAGGGTTCTCAACCTCACTCGTACTGGCATTGTAGAAGTGGATGGCTTCCTCTTAGAAACACACTTGTCTGGAACGTTATCACCTTATCTCGGAAACTTATCTAATCTTCAAGTTCTGGACCTCAGCAACCTGAAGGAGTTGAAGGGTCCAATACCTCCAGAATTGGGCAAGTTAGGTGGCCTCACTCGCCTTTTCCTTTATTCCAACATGCTTTCAGGTGCTATACCGGCGGCATTGGGAAACCTTTCCCAGCTAGAGTTGCTGTATCTTCGCAACAATCACTTATCTGGTATTGCTCCTTCCTCTGTTTTTGGATCTTTGAGATCACTTTCAGAACTGGATCTATCTGCGAACTATTTGTCCGGTAGGATTCCAGCTTCGATTGGGAAGTTGTCATTGCTTACTTGGCTTGATCTGCATGATAACAATTTCCTTGCTAGTATTCCTACAAGTGTTGGAAATCTGAAGAATCTCGAGTATTTGGATTTCTCTTATAATCAAATCAGTGGAAGAATTCCAACATCAATGGGCGGTCTTTCCTATTTATTTTCTTTATATCTGAATCATAACCAAATTACTGGAAGCATTCCTTCATCAATTGGGAGTCTAAGTTCTCTAACATTCTGCCGTATATCAGAGAACAAGCTGACAGGCATTTTACCTCCATCCATTGGGAAGCTCACGAACTTGAAAAGGCTAATTGTTGAGAACAACCAGCTCACTGGGAAGTTGCCTGCTACCATTGGCCATTTAACCAATCTTACAGACTTGTTCTTCGGAAACAATCGTTTTAAAGGAAAAATTCCATCTACTTTAGGAAACTTACTCAACCTTCAAACGTTAGATTTGTCAAAAAACCAACTTTCTGGCGAACTTCCCCCTCAACTCTCAAAATTAAAGAGGTTACAGAGCTTGGACTTATCCTTCAATCCACTAGGAATGGCCAAAATACCAAAATGGTTTTCAAAATTGCAAGTTTTCCGGTTACTATTGGCTAAAACAGGGATTCAAGGGAAACTTCCTCGCTGGTTAGCATCATCATCCATAGGATTACTTGACGTGTCAAGCAATGAAATGACAGGGAAATTGCCTAGGTGGATCGGAAACATGACTATGCTTTCATTCCTGAACTTGTCGAATAACGGATTCCATTCATCAATTCCGGTTGAGTTCAAGAAGCTTCGGTTTCTGATGGACCTTGATCTTCATTCCAACAAGTTCAGTGGTCCTCTGAAAGTGATATATGATAAAGAAGTTGAATTTGCACTTGGGTATTTCAATTCCATTGACCTATCGAACAATACGTTCTCCGGTCCCATTGATGAGAACATAGGGGAGAAACCCTCGTTAATTGCCATCAAATCACTGTACTTGTCACACAACCCATTAGGAGGATCTATACCCAAGTCAATTGGGAAATTGAGAGAATTACAGATCCTGGAGCTGGAGGGCAATGAGCTTTCAGGGCAGATTCCTACGGAGCTTGGGGATGCGCAGGGATTGACTACCATTCGGCTTTCAAAGAACAGATTGAGTGGGAATATCCCAGAAACGGTCATAAATTTGAAGAGACTCCGAGAGTTCGATGTGTCAAGGAACCATCTAAGCGGGAGGATTCCTGCACATAAAACCAATATCCCCAAATCGGCATTTTTTGGTAATCGTGGATTGTGTGGACCACCACTTCCTCCATGTAAGCATTCTTAA 1935 0.4258 MAYEFSSEPLLFIFLLSLSSSISLCLLSEACHAVDKEALLDFKSKISSDPSSLLRSWTSSSDCCHDWEGITCDSTGRVLNLTRTGIVEVDGFLLETHLSGTLSPYLGNLSNLQVLDLSNLKELKGPIPPELGKLGGLTRLFLYSNMLSGAIPAALGNLSQLELLYLRNNHLSGIAPSSVFGSLRSLSELDLSANYLSGRIPASIGKLSLLTWLDLHDNNFLASIPTSVGNLKNLEYLDFSYNQISGRIPTSMGGLSYLFSLYLNHNQITGSIPSSIGSLSSLTFCRISENKLTGILPPSIGKLTNLKRLIVENNQLTGKLPATIGHLTNLTDLFFGNNRFKGKIPSTLGNLLNLQTLDLSKNQLSGELPPQLSKLKRLQSLDLSFNPLGMAKIPKWFSKLQVFRLLLAKTGIQGKLPRWLASSSIGLLDVSSNEMTGKLPRWIGNMTMLSFLNLSNNGFHSSIPVEFKKLRFLMDLDLHSNKFSGPLKVIYDKEVEFALGYFNSIDLSNNTFSGPIDENIGEKPSLIAIKSLYLSHNPLGGSIPKSIGKLRELQILELEGNELSGQIPTELGDAQGLTTIRLSKNRLSGNIPETVINLKRLREFDVSRNHLSGRIPAHKTNIPKSAFFGNRGLCGPPLPPCKHS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g1377 644 FunFam Piriformospora indica-insensitive protein 2 200 297 - -
Glsi05g1377 644 Gene3D Ribonuclease Inhibitor 523 641 IPR032675 -
Glsi05g1377 644 SMART LRR_sd22_2 231 257 - -
Glsi05g1377 644 SMART LRR_sd22_2 158 191 - -
Glsi05g1377 644 SMART LRR_sd22_2 351 383 - -
Glsi05g1377 644 SMART LRR_sd22_2 327 350 - -
Glsi05g1377 644 Pfam Leucine Rich Repeat 305 327 IPR001611 GO:0005515
Glsi05g1377 644 Pfam Leucine Rich Repeat 530 550 IPR001611 GO:0005515
Glsi05g1377 644 Gene3D Ribonuclease Inhibitor 395 497 IPR032675 -
Glsi05g1377 644 Gene3D Ribonuclease Inhibitor 291 394 IPR032675 -
Glsi05g1377 644 ProSiteProfiles Leucine-rich repeat profile. 353 376 IPR001611 GO:0005515
Glsi05g1377 644 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 10 274 - -
Glsi05g1377 644 SUPERFAMILY RNI-like 96 485 - -
Glsi05g1377 644 Pfam Leucine rich repeat N-terminal domain 35 73 IPR013210 -
Glsi05g1377 644 SUPERFAMILY L domain-like 405 623 - -
Glsi05g1377 644 SMART LRR_typ_2 351 374 IPR003591 -
Glsi05g1377 644 SMART LRR_typ_2 303 327 IPR003591 -
Glsi05g1377 644 SMART LRR_typ_2 158 182 IPR003591 -
Glsi05g1377 644 SMART LRR_typ_2 375 399 IPR003591 -
Glsi05g1377 644 SMART LRR_typ_2 183 207 IPR003591 -
Glsi05g1377 644 SMART LRR_typ_2 446 469 IPR003591 -
Glsi05g1377 644 SMART LRR_typ_2 231 254 IPR003591 -
Glsi05g1377 644 SMART LRR_typ_2 134 157 IPR003591 -
Glsi05g1377 644 SMART LRR_typ_2 598 629 IPR003591 -
Glsi05g1377 644 SMART LRR_typ_2 255 279 IPR003591 -
Glsi05g1377 644 SMART LRR_typ_2 550 574 IPR003591 -
Glsi05g1377 644 PRINTS Leucine-rich repeat signature 354 367 - -
Glsi05g1377 644 PRINTS Leucine-rich repeat signature 375 388 - -
Glsi05g1377 644 Gene3D Ribonuclease Inhibitor 202 290 IPR032675 -
Glsi05g1377 644 Gene3D Ribonuclease Inhibitor 32 201 IPR032675 -
Glsi05g1377 644 Gene3D - 504 522 - -
Glsi05g1377 644 FunFam Nuclear pore complex protein NUP107 32 180 - -
Glsi05g1377 644 Pfam Leucine rich repeat 210 268 IPR001611 GO:0005515
Glsi05g1377 644 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 367 644 - -
Glsi05g1377 644 Pfam Leucine Rich repeats (2 copies) 353 388 IPR025875 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g1377 Glsi-ChrGlsi05 62785304 62787238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g1377 97 641 Receptor kinase-like Gene Family AT5G46330 35.607 2.19e-80 274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g1377 05 62785304 62787238 Glsi09g0607 09 4208190 4209461 CCT
Glsi05g1377 05 62785304 62787238 Glsi05g1377 05 62785304 62787238 ECH
Glsi09g0607 09 4208190 4209461 Glsi05g1377 05 62785304 62787238 ECH