Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0681 ATGAACATCAAAATGAACAAATGGTATGGTGGAGTTCTGATTTCATCCTTGTTTATGTTGTTTATGCTTCTGATACTGAGATATGGGGTTATGAAAAACCCTATTGGCGAAGGCTATCTAACTATACCTGTCTTCCTTAATGTTACTAATCATATCGAATGGATAAATCCAGTGGTTCCACCGGCTGTTCAAAATCCAGTGAATACTTCTCAAGTGATTTCTGCTGATGTTGTAGTATCTAGCCTTTTTGCTTGGAGCAACTTCTCCAAGGAAGAGCAACAAGCTCTGCAGACATGGAACCAATTAAAACACTTGATTGATCATGCTCGGGGCTTACCTAATGCAGTAGAAGCCATCAAGGAAGCTGCTGGTGCATGGAATAGTCTTATACACTCAGTTGAAGAGCAAAGAAAAGGTTATGCAAATGAAAGTTCAAATGGGAGAATGAAAGAGAAACAATGTCCCCATTTTCTTAATAACATGAATTCAACAGAACTTGATAATAGTAGTTACAAACTGCAGTTTCCTTGTGGCCTGACACAAGGTACTTCCATCACTGTCATTGGCATTCCAAATGGTCTTCTTGGTAATTTTCGGATTGACTTGACTGGAGAACCACTTCCTGGGGAGCCTGATCCCCCTATCATTTTGCACTATAATGTTAGGCTTCATGGTGATAAAATCACCGAAGATCCTGTTATTGTCCAAAATACCTGGACAGTAGCTCATGATTGGGGCGAAGAGGAGCGGTGTCCTTCCCCTACTCCTGAAAAGGTCAAGAAAGTTGATGAGTTGTGGCAGTGCAATAAGATTGTAGGGAAGAACATTAGCCAACTTTCTGTGGCTGGCATGTATTCACACACTTCAAGGCAATTTTCAGCATCAGAAGCACATTCTAAAAATAAAAAATACTTTCCTTTTAAGCAAGGTTTACCATTTGTTGCAACTGTTCGAGTGGGATCAGAGGGAATCCAGATGACTGTAGATGGAAAGCACTTAACGTCATTTGCTTTCCGTGAAACTTTGGAGCCATGGCTTGTCAGTGAGATGAGAATTTCTGGGGACCTCAAGTTGATTTCTGTTCTGGCCAGTGGTTTGCCCACTTCAGAAGATTCAGAGCATATTATTGATCTGGAATCATTGAAATCAAGTCCTCTATCTGTGGAGACCCCATTGGATCTCTTCATTGGTGTTTTCTCTACAGCTAACAATTTTAAGCGCAGGATGGCTGTTAGAAGAACCTGGCTGCAATACAATGCAGTTCGATCAAGTACAACTGCTGTACGATTCTTTGTTGGTTTGCATAAAAACCAAATAGTTAATGAAGAATTGTGGAAAGAAGCACAGACCTATGGAGACATACAGTTGATGCCATTTGTTGACTACTACAGCCTCATCACTTGGAAAACTCTAGCAATCTGTATATTTGGGACAGAGGTTGTTTCAGCAAAGTTTGTCATGAAGACAGATGATGATGCATTTGTTCGTGTGGATGAAGTGCTAGCTTCTTTGAATAGGATCAATGTTACTCACGGGTTGCTTTATGGACTCATAAATTCAGATTCCCGACCTCACCGTAGTAGTGATAGCAAATGGTACATCAGCCCTGAGGAATGGCATGAAGCGACTTATCCCCCTTGGGCACATGGTCCAGGCTATGTGGTCTCGCACGATATAGCAAGGACGTTGTCCGGGAGATACAGAGACGGTCATTTGAAGATGTTTAAGTTAGAAGATGTGGCAATGGGAATCTGGATCGCAGACATGAAGAAAGAAGGTCTAAAAGTTCGATACGAGAATGAAGGAAGAGTCTATAACGAGGGTTGCAAGGATAATTATGTGGTTGCGCATTACCAGGGTCCAAGGGAGATGCTCTGTTTGTGGCAGAAACTTCAGGAAGGAAAAGGTGCAAAATGCTGTGGTAATAGAAGATGA 1935 0.416 MNIKMNKWYGGVLISSLFMLFMLLILRYGVMKNPIGEGYLTIPVFLNVTNHIEWINPVVPPAVQNPVNTSQVISADVVVSSLFAWSNFSKEEQQALQTWNQLKHLIDHARGLPNAVEAIKEAAGAWNSLIHSVEEQRKGYANESSNGRMKEKQCPHFLNNMNSTELDNSSYKLQFPCGLTQGTSITVIGIPNGLLGNFRIDLTGEPLPGEPDPPIILHYNVRLHGDKITEDPVIVQNTWTVAHDWGEEERCPSPTPEKVKKVDELWQCNKIVGKNISQLSVAGMYSHTSRQFSASEAHSKNKKYFPFKQGLPFVATVRVGSEGIQMTVDGKHLTSFAFRETLEPWLVSEMRISGDLKLISVLASGLPTSEDSEHIIDLESLKSSPLSVETPLDLFIGVFSTANNFKRRMAVRRTWLQYNAVRSSTTAVRFFVGLHKNQIVNEELWKEAQTYGDIQLMPFVDYYSLITWKTLAICIFGTEVVSAKFVMKTDDDAFVRVDEVLASLNRINVTHGLLYGLINSDSRPHRSSDSKWYISPEEWHEATYPPWAHGPGYVVSHDIARTLSGRYRDGHLKMFKLEDVAMGIWIADMKKEGLKVRYENEGRVYNEGCKDNYVVAHYQGPREMLCLWQKLQEGKGAKCCGNRR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0681 644 SUPERFAMILY Concanavalin A-like lectins/glucanases 171 364 IPR013320 -
Glsi05g0681 644 CDD GLECT 171 361 IPR001079 GO:0030246
Glsi05g0681 644 FunFam Beta-1,3-galactosyltransferase GALT1 385 614 - -
Glsi05g0681 644 Pfam Galactoside-binding lectin 171 362 IPR001079 GO:0030246
Glsi05g0681 644 Pfam Galactosyltransferase 406 590 IPR002659 GO:0006486|GO:0016020|GO:0016758
Glsi05g0681 644 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 171 364 IPR001079 GO:0030246
Glsi05g0681 644 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 332 598 IPR002659 GO:0006486|GO:0016020|GO:0016758
Glsi05g0681 644 Gene3D - 160 362 - -
Glsi05g0681 644 Gene3D - 386 620 - -
Glsi05g0681 644 SMART Gal_bind_lectin_2 175 363 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0681 Glsi-ChrGlsi05 57281266 57284929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0681 5 640 Glycosyltransferase AT1G26810 63.240 0.0 843
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2111 02 71460318 71467673 Glsi05g0681 05 57281266 57284929 CCT
Glsi05g0681 05 57281266 57284929 Glsi05g0681 05 57281266 57284929 ECH