Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2111 ATGAAGAAGTGGTATGGAGGCCTGTTGATCATGGCTCTGGGTATGATGTTGATTCTCCTTTACAGCCTTATTGGAATTCAGCCACAGAAACAGTCAGCCTACAGTTTCTTCAATACTCCTGCACCAAACGAGTCCACTGTAAGAAACCATGTTACTATAAACTCGTCTGAGGTAGAACTAAAAGGATTACCAAAACCAACAAAAAGACCACATTTAATACATGTTGAAGGGCTCAATGATCTTCATGAAATGAAAAATGTTTCTGAAGGAGAGTTGAAAGCCATGCTTGTATGGACTCCCTTGTTTTCCCTTCTGTCAAGATCAGATGCTTTACCTGAGACAGCTCAAGGAGTTAAAGAGGCTTCTGTAGCATGGAAACAGCTGTTGTCCACAATTGAGAAGGACAAGGCCTCTAGAATGAGCAAGATAGACAGCCCAGAAAATCAGAAATGCCCATTGTCTGTAACCACACTTGATAAGACAGTGGCAAGCAGTGGAATCATTCTAGAGCTCCCGTGTGGTCTGGTTGAAGATTCTTCTATTACACTGATTGGCATTCCTAATGGGCGAAATAGAAGCTTTCAAATTAACCTTGTAGGCCAACAAACAGAAGAGGAGCCAAATCCTCCAATCATCTTGCATTACAATGTGAGTCTTCCTGGAGAAAATTTGACAGAGGATCCATTTATAATTCAAAATACATGGACTAATAACCTTGGGTGGGGAAAAGAGGAAAGATGTCCTGCACATGGTTCTGCTAACATCCAACAAGTTGATGGATTTGTCCCCTGCAATGTACAAGTTACCAGAAGCAGCAATGAAGAGAATCTAAGCATGGGTCAACCTACTAGTGATATACCTGCTAATATTTCATTGGAAAGTGCACATAGAACTGCTAATTTTCCCTTTGCCGAGGGGAATCCTTTCACTGCCACACTGTGGGTTGGTTCAGAGGGATTTCATATGACTGTGAACGGAAGGCATGAAACATCTTTTGCATTTAGGGAGAAACTTGAACCATGGTTAGTTAGTAGCATCAAAGTAGCAGGTGGTTTAACTCCCTTATCATCCTTGGCAAAAGGTTTACCTGTTACTGAAGATGATGATATAGTTATTGATGTTGAAACACTGAAAGCTCCTTCTATCCCCAGAAAAAGGCTTGTTATGTTAATTGGGGTATTCTCTACTGGAAATAACTTCGAGCGTCGAATGGCCCTTAGGAGGTCTTGGATGCAGTATGAGGCTGTACGTTCTGGAGAAGTTGCTGTCCGATTTTTCATTGGGCTTCACAAGAATTATATAGTTAATTTTGAGCTGTGGAGAGAAGCTCAAGCATATGGAGATATCCAGTTTATGCCTTTTGTTGATTATTATGGTTTGATCACCTTGAAGACAATTGCAATTTGCATTCTAGGGACGAAAACCATCCCTTCTAAATACATCATGAAAACAGATGACGATGCTTTTGTTAGGATTGATGAAGTGCTTTCTAGCCTTAAAGGAAAGCCGTCTGAGGGCCTCTTGTATGGTCTCATATCTTTCAAATCATCGCCTCACAGGGATAAAGATGGCAAATGGTACATCAGTGAGGAGGAATGGCCACATGCTTCATACCCACCATGGGCACATGGTCCAGGTTATATCATTTCTCGAGACATAGCAAAATTCATTGTCCGTGCCCACGAGGAAAGAAAACTCAAGCTTTTCAAATTGGAAGATGTTGCCATGGGGATATGGATTGAACAGTTCAAGAATAGTGGTAAAGAAGTACATTACGCAAATGATGAGAAGTTTTACAATGCTGGATGTGAATCAAATTATATACTTGCCCATTATCAAAATCCAAGGAAGGTGCTGTGCCTTTGGGAGAAGCTGCAGAAAGAACACCAGCCAGCCTGCTGTGAGTAG 1908 0.4135 MKKWYGGLLIMALGMMLILLYSLIGIQPQKQSAYSFFNTPAPNESTVRNHVTINSSEVELKGLPKPTKRPHLIHVEGLNDLHEMKNVSEGELKAMLVWTPLFSLLSRSDALPETAQGVKEASVAWKQLLSTIEKDKASRMSKIDSPENQKCPLSVTTLDKTVASSGIILELPCGLVEDSSITLIGIPNGRNRSFQINLVGQQTEEEPNPPIILHYNVSLPGENLTEDPFIIQNTWTNNLGWGKEERCPAHGSANIQQVDGFVPCNVQVTRSSNEENLSMGQPTSDIPANISLESAHRTANFPFAEGNPFTATLWVGSEGFHMTVNGRHETSFAFREKLEPWLVSSIKVAGGLTPLSSLAKGLPVTEDDDIVIDVETLKAPSIPRKRLVMLIGVFSTGNNFERRMALRRSWMQYEAVRSGEVAVRFFIGLHKNYIVNFELWREAQAYGDIQFMPFVDYYGLITLKTIAICILGTKTIPSKYIMKTDDDAFVRIDEVLSSLKGKPSEGLLYGLISFKSSPHRDKDGKWYISEEEWPHASYPPWAHGPGYIISRDIAKFIVRAHEERKLKLFKLEDVAMGIWIEQFKNSGKEVHYANDEKFYNAGCESNYILAHYQNPRKVLCLWEKLQKEHQPACCE 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2111 635 Gene3D - 167 358 - -
Glsi02g2111 635 CDD GLECT 169 353 IPR001079 GO:0030246
Glsi02g2111 635 Pfam Galactosyltransferase 401 584 IPR002659 GO:0006486|GO:0016020|GO:0016758
Glsi02g2111 635 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 326 583 IPR002659 GO:0006486|GO:0016020|GO:0016758
Glsi02g2111 635 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 167 361 IPR001079 GO:0030246
Glsi02g2111 635 SUPERFAMILY Concanavalin A-like lectins/glucanases 169 356 IPR013320 -
Glsi02g2111 635 FunFam Beta-1,3-galactosyltransferase GALT1 381 608 - -
Glsi02g2111 635 Gene3D - 384 632 - -
Glsi02g2111 635 SMART Gal_bind_lectin_2 171 359 IPR001079 GO:0030246
Glsi02g2111 635 Pfam Galactoside-binding lectin 168 353 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2111 Glsi-ChrGlsi02 71460318 71467673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2111 1 635 Glycosyltransferase AT3G06440 52.821 0.0 644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2111 02 71460318 71467673 Glsi05g0681 05 57281266 57284929 CCT
Glsi02g2111 02 71460318 71467673 Glsi02g2111 02 71460318 71467673 ECH