Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0738 ATGTTGCATCCTTGTGTGATCAGTTCAATTTCTGGAGTAAGATTTAGTATTTTTTGCCAAGTAAGCCGGAATCTCTTTTTTGCTCGTGAAAATTGGAATTCAAGCAAAATGAACATGGCGGTCAATTTTCCATCTATACCATGCCTAGTAATTTGCCAGTGCCCTGCGACTCGAGTACGCAGCACCTTCTTGGTTCCCCAACACCAACCAACTTTAATGGAACCACCTCTGGATTATTGCAACAGCAGCAGCAATGGCTACTATGGCTATGATATTATTAGCTGGTTTGAAGATGTAACCAAGAACGCAGGCTCTGTTCAGACCCAGACGCTATGCCAGATTCTGAAGCAGAACTGTGGGGTGGAATATCTCAAGAAATGGCTAGGGGAATACAATATCCCAGACATGGATGCTCGTACATTGGAATCCCTTTTTAGTTCTGTGGTTCCCCTTGCGTCTCATGCAGATTTTGAGCCTTTTATCCAAAGGATTGCAGATGGGGACACTTCTGTTCTCACTCAACAACCCTTAACCACTCTTTCCTCGAGTTCTGGAACCACAGATGGCAGGCAAAAGTTTGTACCTTTTACCCGCCATAGCGCGCAGACTACCCTTCAAATTTTCACTTTAGCAGCAGCCTATAGATCAAGGGTTTATCCCACAAGGGAAGGAGGTAGGATTCTTGAATTCATATATAGCAGCAAGCAGTTTAAAACAAAAGGGGGCTTAACGGTAGGAACAGCCACAACACACTACTATGCAAGTCAAGAGTTCAAGATCAAACAGGAGAAAACTAAGTCATTTACTTGCAGCCCAGATGAAGTAATCTCAGGTGGAGACTATAAACAAGTCACATATTGTCATCTCGTCCTTGGCCTCTTCTACTCCGATCAAGTAGAGTTCATCACCTCAGCCTTTGTCTATAGCATAGTGCAAGCTTTTCGAAGTTTCGAAGAGCTTTGGAGAGAGATATGCAGTGACATTAAAAAAGGTACTCTGAGTTCAAGAATCAAAATACCCAAAATGAGAAAAGCTGTTTTGGATATTATCTCTGATCCACACCCATATTTGGCTTCAAAGTTAGAAGCAGCATGCGCGGAGTTAGAAGTGGTGAATTGGTTTGGTCTGATTCCCAAGCTTTGGCCTAATGCAAAGTATGTGTATTCCATAATGACAGGATCTATGCAGCCATACTTAACAAAACTAAGGCATTATGCTGATGGGTTGCCTTTAGTAAGTGCTGACTATGGCTCAACTGAGAGCTGGATAGGAGTTAATGTGAGTCCTAGTTTGCCTCCAGAAGATGTAACCTTTGCTGTAGTACCCACTTTCTCTTACTTTGAGTTCATACCACTTTACAAACAGAAACAAGATTGCAGTTCAGTTGCTGATGATTTCATGGAAGATAAGCCAATTCCACTATCCCAGGTTGAAGTTGGACGAGAATATGAAGTAGTCCTCACAACTTTCACAGGGCTATATAGATACAGACTAGGGGATGTTGTAGAAGTGGCTGGTTTTCACAATGGGACTCCAAAATTGAACTTTATGTGCAGAAGGAAGCTAATTCTAACGGTGAACATAGACAAGAACACAGAGAAGGACCTACAGCTAGTGGTAGAAAGGGGGTCACAGCTTCTAAATATGGCCCAAGCCGAGCTCGTGGATTTTACTAGCTATGCCGATATGTCAAACCAACCAGGGCACTACGTAATTTTCTGGGAAATCAAAGGGGAGGTAGAGGACAAGGTTCTTGACCAGTGTTGCAGAGAAATGGACGCTTCTTTTGCAGATCATGGGTATGTGGTCTCGAGGAAGACCAATTCCATAGGGCCGCTAGAGCTTCGCTTGGTAGAGAGAGGAACTTTTAAGAAGATTTTGGATTACTTCGTTGCAAATGGGGCAGCATTGAGCCAATTCAAGACCCCTAGGTGCACTAATAACCCGGTCCTTCTGAAGATTCTTAATGCTTGCACCTTTAAAAGGATTTGTAGCACAGCTTACAGTTTGCAAGAGGTGGATCACTAA 2028 0.4305 MLHPCVISSISGVRFSIFCQVSRNLFFARENWNSSKMNMAVNFPSIPCLVICQCPATRVRSTFLVPQHQPTLMEPPLDYCNSSSNGYYGYDIISWFEDVTKNAGSVQTQTLCQILKQNCGVEYLKKWLGEYNIPDMDARTLESLFSSVVPLASHADFEPFIQRIADGDTSVLTQQPLTTLSSSSGTTDGRQKFVPFTRHSAQTTLQIFTLAAAYRSRVYPTREGGRILEFIYSSKQFKTKGGLTVGTATTHYYASQEFKIKQEKTKSFTCSPDEVISGGDYKQVTYCHLVLGLFYSDQVEFITSAFVYSIVQAFRSFEELWREICSDIKKGTLSSRIKIPKMRKAVLDIISDPHPYLASKLEAACAELEVVNWFGLIPKLWPNAKYVYSIMTGSMQPYLTKLRHYADGLPLVSADYGSTESWIGVNVSPSLPPEDVTFAVVPTFSYFEFIPLYKQKQDCSSVADDFMEDKPIPLSQVEVGREYEVVLTTFTGLYRYRLGDVVEVAGFHNGTPKLNFMCRRKLILTVNIDKNTEKDLQLVVERGSQLLNMAQAELVDFTSYADMSNQPGHYVIFWEIKGEVEDKVLDQCCREMDASFADHGYVVSRKTNSIGPLELRLVERGTFKKILDYFVANGAALSQFKTPRCTNNPVLLKILNACTFKRICSTAYSLQEVDH 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0738 675 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 92 668 IPR004993 -
Glsi04g0738 675 Pfam GH3 auxin-responsive promoter 95 648 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0738 Glsi-ChrGlsi04 5204727 5214151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0738 91 655 EF-hand Containing Proteins AT1G23160 35.690 3.27e-122 374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1345 14 14303086 14309914 Glsi04g0738 04 5204727 5214151 CCT
Glsi04g0738 04 5204727 5214151 Glsi04g0738 04 5204727 5214151 ECH