Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0441 ATGTTTGGCTTGGCATTATCAAAGTTTGTAATAATGCTTTTTTGGTATTTGGAGGATTGGAGATGGTCGTCGTACTACTCGTTTCTCGACAGACCATGGGTGCCTGGTATTTCAACCTTGAAAAATATACTCTTGTTGGGATATCTGATCCAGAGAGACTGGACGGTGGATAGTTATGCTCCTGTTGATGGTGATTGGCTTTGGGTGGCTTTTACTCGTCATCTTCCTGAATATGCACTTAACCTTATTTCAAGCTTTGAACCTCCTACGCCAGGGACTGCATATACCAACGCCCTTCGCTGCCTTAGGGGTCTAATTAATTCTGATCGTTGCCCGATGGGTTGTGGAAATAGAGAAACTGTTATTCACCCTGTGCGTCACTGCAACAAAGCGACGTCTCGTTGGCTTCGCTTGGTGTACCCGAAGCATTGGCAAGATTTTTTGTCAGCTAGCCTTCAAGACTGGATTGAGCTTAGCATGAGAAAGAAATTGGGTAATGGAGATAATCACGAATTGGACTGGCAGGTGGTTTTTGGCATGATTGGGACCGCGAGGCCAACTTTGTGGCACATTGGATGGCCAAGTTTGCCCAATCTGAGACTTCGGGTCTTCATGTCTACGAGGATCCCCTGCGGGTTGTGGCTCTCTGATAATGGAAGATTAACAGGGGTTCAGCGGCCTTGTCGCGCCATTGGTGCTTCTATCCGTTTTGCTTTCCCTACATCCAAACCGGGAGAAATGGCGGTGGCTTTCCCCGCTGATATTCTCATTGCTATCGTGCTGTTTTCAGCGGCTGCGGTCACTTATGGATTCCCGGCGACTCTGACTCTGGAAAGAGCATTTCCGTCCAATCATGGAATCAAGCTGAGTCAGCTCAGAGCTTGGGACAAGGTCAGGCATCAGAGAATGTTGCAGTCTTCAGACGATGTCGTCGATTTCCCACTCAATGGGACCTACGATCCACTCACAGTCGGGCTTTACTTTACGAAGGTGCAGTTAGGTTCCCCTCCAAGAGAATTTTATGTGCAGATTGACACTGGCAGTGATGTTCTCTGGGTTAGCTGCAGCTCCTGCACTGGTTGCCCAGAACCAAGTGGGCTCAATATTAAACTCAATGTTTTCGATCCCGGTAATTCATCAACATCTTCAGTGGTATCTTGTTCAGACAAAATATGCACTGATGGAATTCGATCATCAGAGGCCAGCTGTTCTGATCCGAAGTGCTCTTACACATTCCAGTACGCGGATGGTAGTGCGACGACAGGATATTACGTGTCAGACATGATGCAGTTGGCAGTGGGGTCCGCGACTTCAAATTCTTCAGCACGTGTAGTATGTAGCAACCAGCAGTCTGGGAACTTGAATAGGAACTCGGACAAAGATAGAGCAGTCAATGGGATATTTGGATTCGGGCCACAAGCCTTGTCTGTCATCTCCCAGCTCTCCTTACAAGGAAAAGTGCCAAGAGTGTTCTCTCACTGCCTGAGAGGGGATAGTGAAGGCGGGGGCAAGTTGGTTCTTGGCGAGATTGTGGAGCCAAAGATGGTTTATAGTCCACTAGTTCCATCAATGCCTCATTACAATTTAAATCTGCAGAGCATCTCCGTTAATGGCGAAAAGCTACCAATTGATTCAAAAGTTTTTGAAACATCAAGCAACGGAGGTACCGTTATTGATTCTGGAACAACTTTGGCATATCTGGCCGATGAGGCTTACGATCCCTTTGTCAGAACTGTTACAGCTAAAATTCCAGAATCCACACCCTCTGCTGAATCCGAGGACTACCAGTGTTACGTAATCTCCTCTAGCATCTCTGATGTTTTTCCTGAAGTAAGTCTGAACTTTGCTGGCGATGCAACTATGGTTTTAAAACCACAGGACTACCTTATACGGCAGACCGCTCCTAGTGGCGAAGAAGGGTGGTGTGTTGCCTTTCAGAAAATCCAGGGTCCAGCTCAAGGGATAACAATTTTAGGAGATATTGTATTAAAAGACAAGATTATAGTTTATGATCTGGCTGGTCAACGCATAGGATGGGCTGATTATGACTGCTCCAAACCCTTCAATGTCTCTTCAAAATCTGGCACTAGAATTGACGCCAATGCAGGAGCGCCAAGCAGCGGCACTTCAAGGGATAGGCCTCACAAGGCAGTGGTCTTGGCTTTCTTCACGGACATAACAGTAACACTGATCTGTTGCTTTTTGCTATTTTAG 2214 0.467 MFGLALSKFVIMLFWYLEDWRWSSYYSFLDRPWVPGISTLKNILLLGYLIQRDWTVDSYAPVDGDWLWVAFTRHLPEYALNLISSFEPPTPGTAYTNALRCLRGLINSDRCPMGCGNRETVIHPVRHCNKATSRWLRLVYPKHWQDFLSASLQDWIELSMRKKLGNGDNHELDWQVVFGMIGTARPTLWHIGWPSLPNLRLRVFMSTRIPCGLWLSDNGRLTGVQRPCRAIGASIRFAFPTSKPGEMAVAFPADILIAIVLFSAAAVTYGFPATLTLERAFPSNHGIKLSQLRAWDKVRHQRMLQSSDDVVDFPLNGTYDPLTVGLYFTKVQLGSPPREFYVQIDTGSDVLWVSCSSCTGCPEPSGLNIKLNVFDPGNSSTSSVVSCSDKICTDGIRSSEASCSDPKCSYTFQYADGSATTGYYVSDMMQLAVGSATSNSSARVVCSNQQSGNLNRNSDKDRAVNGIFGFGPQALSVISQLSLQGKVPRVFSHCLRGDSEGGGKLVLGEIVEPKMVYSPLVPSMPHYNLNLQSISVNGEKLPIDSKVFETSSNGGTVIDSGTTLAYLADEAYDPFVRTVTAKIPESTPSAESEDYQCYVISSSISDVFPEVSLNFAGDATMVLKPQDYLIRQTAPSGEEGWCVAFQKIQGPAQGITILGDIVLKDKIIVYDLAGQRIGWADYDCSKPFNVSSKSGTRIDANAGAPSSGTSRDRPHKAVVLAFFTDITVTLICCFLLF 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0441 737 SUPERFAMILY Acid proteases 324 687 IPR021109 -
Glsi04g0441 737 CDD pepsin_A_like_plant 327 684 IPR034161 -
Glsi04g0441 737 PRINTS Pepsin (A1) aspartic protease family signature 333 353 IPR001461 GO:0004190|GO:0006508
Glsi04g0441 737 PRINTS Pepsin (A1) aspartic protease family signature 656 671 IPR001461 GO:0004190|GO:0006508
Glsi04g0441 737 PRINTS Pepsin (A1) aspartic protease family signature 556 567 IPR001461 GO:0004190|GO:0006508
Glsi04g0441 737 Gene3D Acid Proteases 508 693 IPR021109 -
Glsi04g0441 737 ProSiteProfiles Peptidase family A1 domain profile. 327 680 IPR033121 -
Glsi04g0441 737 Pfam Xylanase inhibitor N-terminal 327 508 IPR032861 -
Glsi04g0441 737 Gene3D Acid Proteases 300 507 IPR021109 -
Glsi04g0441 737 FunFam Aspartic proteinase-like protein 2 510 691 - -
Glsi04g0441 737 PANTHER ASPARTYL PROTEASES 272 678 IPR001461 GO:0004190|GO:0006508
Glsi04g0441 737 Pfam Xylanase inhibitor C-terminal 526 680 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0441 Glsi-ChrGlsi04 2942156 2949273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0441 301 686 Miscellaneous Gene Families AT1G44130 27.027 1.07e-34 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1620 14 16575630 16580551 Glsi04g0441 04 2942156 2949273 CCT