Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3367 ATGGAATTTGGGAAGCCTATCCGAAGGGATATGTTGACGACTCAAAATGTCTCCGGCTTATCCATTAAAGTTGCATCCCTGTAGCTCGGAGCAGCAGCACCCATTCCTCAGCGTGAACAACCCAACCCAACCCATGTTTATTTTCAAAACAAAAGGTTGAGGAAGAGGGATTGCGGCTTGCAGTTGGCTGGGCAGTTGTCGGTTGGGTGCTATTACTTTGGGCAGTCCACCATGACTTTCTTCCTTTCCTGCTCTACTCTGCTCTTCCTTCTTTCTTTCTTTTCCACTACTCTGCTCCACTGTGATGCCTTCCCTTTCCCTCCCCATTACAATCACCCCATACGCCACCGCCACCGCCCTCGTTTTGCCACCCACAACTACAGAGATGCTCTCACCAAATCCATCCTCTTTTTTGAGGGTCAGAGGTCAGGGAAGCTCCCTTCTAATCAGAGGATCACTTGGAGGAGGGACTCTGGTCTCTCAGATGGCTCCGCCATGCATGTTGATTTGGTTGGAGGCTACTACGATGCAGGGGACAATGTCAAGTTTGGTTTTCCCATGGCATTCACCACCACCATGCTTTCATGGAGTGTCATTGAGTTTGGTGGGCTAATGGGAGGTGAACTGCAGAATGCAAGAGAGGCGATTCGCTGGGCTACCGATTATCTTCTTAAAGCCACTGCACATCCAGACACCATATACGTTCAGGTAGGAGATGCTAAGAAGGACCACGCTTGTTGGGAGAGACCTGAAGACATGGATACCCCAAGAAGTGTCTTTAAGATAGATAAGAATACTCCCGGTTCAGAAGTGGCCGCTGAAACTGCTGCGGCTCTTGCTGCTGCTTCTCTGGTTTTCAGAAGAATAGACCCCAGATACTCCGGGACTTTGATCAGGAGGGCTATTAGGGTGTTCCAGTTTGCTGATAAATACAGGGGATCTTACAGCAATGGCTTGAAGCCCATTGTTTGCCCCTTCTATTGCTCTTACTCTGGTTATCAGGATGAGTTATTGTGGGGTGCTGCTTGGCTGCACAAGGCTACTAAGAACCCAATGTTCCTAAACTACATTCAAGTTAATGGAGAGACCCTTGGGGCAGCAGAGTTTGACAATACCTTTGGGTGGGATAACAAGCACGTTGGAGCAAGGATACTTCTTTCCAAGGAATTTCTCATTCAAAGGGTACAATCCCTCCATGAATACAAGGGTCATGCGGACAATTTCATCTGTTCTCTCATTCCTGGAAGGTCTTTCTCTTCAGCCCAATATACCCCAGGTGGGCTTCTGTTCAAGATGAGTGATAGCAACATGCAGTATGTGACGTCCACTTCCTTCCTACTCTTAACCTATGCCAAATACTTGACCTCATCCCACATGGTTGTTAACTGTGGCGGAACCGCTGTAACCCCAAAGAAGCTCCGGGCTATAGCCAAGAAACAGGTGGATTACCTGCTTGGAGATAACCCCTTGAAAATGTCCTACATGGTAGGGTATGGTCCCAGGTACCCACGAAGGATACACCACAGGGGCTCATCTCTACCGTCCATCGCTGTACACCCTGCCAAGATCCAATGCTCAGCAGGCTTCGGTGTGATGAGTTCACAAACCGCCAACCCCAACGTTCTAGTGGGTGCCGTTGTTGGTGGACCCGACCTGCATGACAGATTCCCAGATGAACGGTCCGATTATGAGCAATCAGAGCCAGCCACTTACATCAACGCACCCCTTGTAGGAGCACTGGCTTATCTTGCTCACTCGTTTGGCTAA 1767 0.4918 MEFGKPIRRDMLTTQNVSGLSIKVASLXLGAAAPIPQREQPNPTHVYFQNKRLRKRDCGLQLAGQLSVGCYYFGQSTMTFFLSCSTLLFLLSFFSTTLLHCDAFPFPPHYNHPIRHRHRPRFATHNYRDALTKSILFFEGQRSGKLPSNQRITWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMGGELQNAREAIRWATDYLLKATAHPDTIYVQVGDAKKDHACWERPEDMDTPRSVFKIDKNTPGSEVAAETAAALAAASLVFRRIDPRYSGTLIRRAIRVFQFADKYRGSYSNGLKPIVCPFYCSYSGYQDELLWGAAWLHKATKNPMFLNYIQVNGETLGAAEFDNTFGWDNKHVGARILLSKEFLIQRVQSLHEYKGHADNFICSLIPGRSFSSAQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSSHMVVNCGGTAVTPKKLRAIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSIAVHPAKIQCSAGFGVMSSQTANPNVLVGAVVGGPDLHDRFPDERSDYEQSEPATYINAPLVGALAYLAHSFG 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3367 588 PANTHER ENDO-1,4-BETA-GLUCANASE 112 585 - -
Glsi02g3367 588 FunFam Endoglucanase 123 588 - -
Glsi02g3367 588 SUPERFAMILY Six-hairpin glycosidases 124 586 IPR008928 GO:0005975
Glsi02g3367 588 Gene3D - 122 588 IPR012341 GO:0005975
Glsi02g3367 588 Pfam Glycosyl hydrolase family 9 127 580 IPR001701 GO:0004553|GO:0005975
Glsi02g3367 588 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 556 574 IPR033126 -
Glsi02g3367 588 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 483 509 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3367 Glsi-ChrGlsi02 81304135 81307767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3367 78 586 Glycoside Hydrolase AT1G02800 75.049 0.0 766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3367 02 81304135 81307767 Glsi11g0485 11 3183713 3187784 CCT
Glsi02g3367 02 81304135 81307767 Glsi02g3367 02 81304135 81307767 ECH