Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3319 ATGGCCACCCTCTCTGCTTGCTCTTCATCTCCTTGGCCGAGCCCTAACCCTAAATCTGATCCAAATCATAAGTTCCAAGCAGACCAATCTCAAACTCCTGACTTGGATTCGATAATACCTAGCCAATCAAATCTACTTCAGCATCACAACCTTCCCGATGACTCCCCCTATAATCAAAATCCCCCCAATATTTCCCCCGAATCGCCAGCTCGGACGACCCCTCCTTCTTTGCTTCAACTCTCTTTCAACCAAGACCAAGCTTGCTTCGCCGCCGCCACTGACAACGGCTTCCGTATCTACAATTGCGATCCATTCCGGGAGCTCTTCCGCAGAGAGTTTGATGGAGGCGGTGGCATTACTGGTGGAATTGGCCACGTGGAGATGCTCTTTCGCTACAATTTACTGGCACTGGTAGGAGGTGGCTCCCACCCTCAGTACCCTATCAATATGGTGAAGATCTGGGACGATCTTCAGGGCAAATGCATTGGTGAGCTTTCGTTCCGAGCTGCCGTTCGTGGTGTCCGGCTTCGACGAGACCGAATAATTGTTGTTGGGGAGCAGAAGATATTCGTGTACAATTTCGCGGACCTTGAGTTACTTCATCAGATTGAGACCATTGCAAACGCGAAGGGGCTCTGCGCAGTTTCGCAATTGGCTGATTCCCTGGTGTTGGCGTGCCCGGGTTTGCGTAAGGGTCAGATTCGAGTTGAGCAGTATGCACTGAAAAAGACCAAATTCATTTCGGCTCATGATTCTAGTATAGCTTGTTTAGCCCTCACTCTTGATGGGCAGTTACTCGCCACCGCCAGCACTAAGGGAACTCTAATTCGGATTTTTGATACAGCTAGTGGCACGCTGCTTCAAGAAGTAAGAAGGGGTGCAAATGCAGCAGAGATCTATAGTTTGTCATTCTCTTCTACAGGTCAGTGGTTAGCAGTTTCAAGTGACAAGGGTACTGTCCATGTTTTCAGCCTTAAGGCTAATTCTAGTTCTCCCGAGCATGAAAAATTCCAGAGTACATCTATTACACCGTCTAGCTCATCTCTCGCATTTGGTAAATTTAAAGGAGTGATACCCAAGTATTTTAATTCAGAGTGGTCAGTTGCTCAGTTTCACTTACAAGAGGGCTCTCATTACACAGTTGCTTTTGGTCACCAAAAGAATACGGTCATAATTCTTGGCATGGATGGGAGCTTCCACCGATGTCAATTTGACCCAATCCATGGTGGGAAGATGACTCGGCTGGAACACCACAACTTTTTAAAGCCAGAGACAGCAGACTTGTGA 1287 0.4771 MATLSACSSSPWPSPNPKSDPNHKFQADQSQTPDLDSIIPSQSNLLQHHNLPDDSPYNQNPPNISPESPARTTPPSLLQLSFNQDQACFAAATDNGFRIYNCDPFRELFRREFDGGGGITGGIGHVEMLFRYNLLALVGGGSHPQYPINMVKIWDDLQGKCIGELSFRAAVRGVRLRRDRIIVVGEQKIFVYNFADLELLHQIETIANAKGLCAVSQLADSLVLACPGLRKGQIRVEQYALKKTKFISAHDSSIACLALTLDGQLLATASTKGTLIRIFDTASGTLLQEVRRGANAAEIYSLSFSSTGQWLAVSSDKGTVHVFSLKANSSSPEHEKFQSTSITPSSSSLAFGKFKGVIPKYFNSEWSVAQFHLQEGSHYTVAFGHQKNTVIILGMDGSFHRCQFDPIHGGKMTRLEHHNFLKPETADL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3319 428 Gene3D - 72 407 IPR015943 GO:0005515
Glsi02g3319 428 SUPERFAMILY WD40 repeat-like 74 327 IPR036322 GO:0005515
Glsi02g3319 428 Pfam WD domain, G-beta repeat 293 323 IPR001680 GO:0005515
Glsi02g3319 428 FunFam Autophagy-related protein 18a isoform A 75 406 - -
Glsi02g3319 428 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 73 420 - -
Glsi02g3319 428 SUPERFAMILY WD40 repeat-like 299 405 IPR036322 GO:0005515
Glsi02g3319 428 SMART WD40_4 158 193 IPR001680 GO:0005515
Glsi02g3319 428 SMART WD40_4 283 324 IPR001680 GO:0005515
Glsi02g3319 428 SMART WD40_4 240 280 IPR001680 GO:0005515
Glsi02g3319 428 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3319 Glsi-ChrGlsi02 81049679 81053119 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3319 02 81049679 81053119 Glsi02g3319 02 81049679 81053119 ECH
Glsi02g3319 02 81049679 81053119 Glsi11g0234 11 1576999 1580443 ECH