Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3307 ATGATTACTCCAACAGTTGTCACATTGAGTAATTGTGATAACCACATTACGCGACAATTCTTAGTGGGGTTGGTAGGTGGTGTAGAGTTATCACAATTGCCAGATTTCGTGGAGATGGGAGTTGTTACTATTGCTGAATTGAAGCCCAGCATTTCAGGGAAGAGGTCCTTTCGTCCAAGTTCAAGCATCAGGCATGCCACTGAATGGCCAATATCTGATGTCTCTAGCGACCTTACCATCGAAGTAGAAAAATCAAGCTTGGCACTTCACAAGTTTCCTTTAGTTTCTAGGAGTGGAAAAATTAGAAAACTGCTGTTAGAAGCAAAAGATTCCAAAGTTTCGCGCATTAGTCTCCCAACAGTTCCAGGTGGAGCAGAGGCATTTGAGTTAGCTGCCAAGTTCTGTTATGGAATTAACATCGAGTTCACCCTCTCAAATGTTGCTATGCTACGTTGTGTGGCCCATTTTCTGGAAATGACAGAAGAGTTTGCAGACAAAAACTTGGAGATCCGGGCTGAAGCATATCTAAAGGAGACAGTGCTCCCAAATATTTCAAGCTCAATAGCTGTTCTTAATCGTTGTGAAACTCTTCTGCCTATATCAGAAGAGATAAACCTTGTCAGCAGGCTAATCAATGCAATAGCAAATAATGCATGCAAAGAGCAGCTTGCCTCTGGTTTGCTAAAACTGGATCACAATTTCCCTTCTAAAACTATCTCAAGCATGGAACCAGAAACACCCTCAGGTTGGTGGGGAAAATCTCTAAATGTTCTTAATCTTGATTTCTTCCAACGAGTCCTATCTGCAGTGAAGTCAAAGGGACTAAAACAGGACATGATCAGCAAAATTTTGATAAACTATGCACATAATTCTCTTCAGGGGATTGTTGCTCGGGACCCTAAAGTGGTCAAAGAAAGTTTACTGGATTTAGAATTGCAGAAGAAGCAACGGGTCATTGTTGAAGCCATAGTTAACTTACTACCAACTCAGTCCAGGAAAAGTCCGGTTCCAATGGCTTTTCTTTCAAGTTTGCTGAAAGCTGCAATAGCAGCATCAGCATCTACTTCTTGCAGATCTGATTTGGAGAGGAGGATAGGTCTGCAACTTGACCAGGCAATTCTTGAAGACATTCTAATTCCAGCAACTTCAAATCAAAATTCCCACAGCACAATGTATGATACGGATTCAATTTTGAGGATCTTTTCCATTTTTCTAAACTTGGATGAGGACGATGAAGAAGATAGTCACTTGAGAGATGAGAGTGAGATGGTTTATGACTTTGACAGCCCCGGATCCCCGAAGCAAAGCTCAATCCTAAAAGTATCCAAGTTGTTAGATAATTATCTTGCTGAAATAGCATTGGACTCCAACTTGTTGCCATCAAAATTCATAGCACTTGCAGAACTACTTCCAGATCATGCACGTATTGTAAGTGATGGACTCTATAGAGCGGTTGATATCTTCCTTAAGGTTCATCCAAACATAAAAGACTCAGAGCGTTATCGCCTCTGCAAAACCATTGACTGTCAAAAACTCTCTCAAGAAGCCTGCAGCCATGCTGCTCAAAACGAGAGGCTGCCAGTGCAGATGGCAGTCCAAGTTCTTTACTTCGAGCAAATCAGGCTTCGAAATGCCATGAATGGGGGACACAATCAGTTCTTGTTTGCTGGTATGAACGGTCAATTCCCTCAACGTTCAGGGAGTGCTGCGGGAAGTGGAGCCATTTCCCCAAGAGATAACTATGCATCAGTAAGAAGAGAGAACCGAGAGCTGAAGCTTGAAGTTGCAAGAATGAGAATGAGGCTGACTGACTTGGAGAAAGATCATGTGTCCATGAAGCAGGAGCTTGTAAGGTCTCATCCTGCAAACAAGCTATTTAAATCATTTACAAAGAAACTTAGCAAGCTCAATGCTCTATTTCGGATTAACAATATTAAGCCAATGGGAGGGAAAACTGGTTCTGAAAGTCGGTTCCCTTTTCAAAAGCGAAGGCGTCACTCAGTTTCATGA 2010 0.4204 MITPTVVTLSNCDNHITRQFLVGLVGGVELSQLPDFVEMGVVTIAELKPSISGKRSFRPSSSIRHATEWPISDVSSDLTIEVEKSSLALHKFPLVSRSGKIRKLLLEAKDSKVSRISLPTVPGGAEAFELAAKFCYGINIEFTLSNVAMLRCVAHFLEMTEEFADKNLEIRAEAYLKETVLPNISSSIAVLNRCETLLPISEEINLVSRLINAIANNACKEQLASGLLKLDHNFPSKTISSMEPETPSGWWGKSLNVLNLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGIVARDPKVVKESLLDLELQKKQRVIVEAIVNLLPTQSRKSPVPMAFLSSLLKAAIAASASTSCRSDLERRIGLQLDQAILEDILIPATSNQNSHSTMYDTDSILRIFSIFLNLDEDDEEDSHLRDESEMVYDFDSPGSPKQSSILKVSKLLDNYLAEIALDSNLLPSKFIALAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQFLFAGMNGQFPQRSGSAAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVRSHPANKLFKSFTKKLSKLNALFRINNIKPMGGKTGSESRFPFQKRRRHSVS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3307 669 PANTHER OS12G0117600 PROTEIN 72 630 IPR043454 -
Glsi02g3307 669 MobiDBLite consensus disorder prediction 648 669 - -
Glsi02g3307 669 ProSiteProfiles NPH3 domain profile. 249 541 IPR027356 -
Glsi02g3307 669 Pfam BTB/POZ domain 75 160 IPR000210 GO:0005515
Glsi02g3307 669 Coils Coil 581 615 - -
Glsi02g3307 669 Gene3D Potassium Channel Kv1.1; Chain A 61 181 IPR011333 -
Glsi02g3307 669 ProSiteProfiles BTB domain profile. 76 144 IPR000210 GO:0005515
Glsi02g3307 669 SUPERFAMILY POZ domain 60 161 IPR011333 -
Glsi02g3307 669 Pfam NPH3 family 250 517 IPR027356 -
Glsi02g3307 669 FunFam BTB/POZ domain-containing protein At1g03010 54 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3307 Glsi-ChrGlsi02 80946388 80950755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3307 39 491 EF-hand Containing Proteins AT2G47860 60.206 0.0 547
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3307 02 80946388 80950755 Glsi11g0549 11 3555526 3563890 CCT
Glsi02g3307 02 80946388 80950755 Glsi02g3307 02 80946388 80950755 ECH