Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3272 ATGACAGGGCTTGTAATGGTGACGAAGGGTGGTGGGTGCGGCGGTGGGAAGGAAACGAAGGGAGCTAAAACCACCGAAGAAGAGCAGAACCAGCTCTCTCTGGTTGCACTTCTCTTGGCCGCCTTGAGGAAATCCATGGTGGCATGCCGGGTGGATCGGCCCGATGATGTGATCTCGACCGTTCATCACATGGAAATCGGATGGCCCACGAACGTTCAGCACATCACTCATGTCACTTTCGATCGCTTCAATGGGTTTCTGGGTCTTCCCGTCGAGTTCGAGGTGGAGATCCCGGGTCGGGTTCCCAGTGCTAGTGTAAGTGTGTTTGGCGTGTCAGCAGAATCAATGCAGTGTTCTTATGATTCAAAAGGAAATAGTGTCCCGACTATTCTCTTGCTAATGCAGGATCGTTTATACTCACAGGGAGGCCTAAAGCGCGAAGGAATATTTCGCATAAACCCAGAAAACAGTCAAGAGGAGCATGTGAGGGACCAGTTGAATCGGGGAATTGTACCGGATGACATTGATGTCCACTGCTTGGCAGGCCTGATTAAAGCCTGGTTCCGAGAGCTTCCTTCAGGAGTGCTAGATGGACTTTCCCCTGAACAAGTTCTTCAGTGCAACACGGAGGAAGAATCTGTTGAGCTTGTGAAGCAGCTAAAACCAACTGAGGCTGCCTTGCTCAACTGGGCTATTGATCTCATGGCTGATGTTGTAGAGGATGAGGAACACAACAAAATGAATGCAAGAAATATTGCTATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCACTAACGGCTCTGATGCACGCGGTCCAAGTTATGAACTTACTCAAGACACTGATAATGAAGACTATTAGAGAACGCGAAGAAACAATGACAGGGGGATATTCACCCATGTCATTTCATTCATCGGATCGCCAATCTGAGGATGAATATGAAAGTCAGCAAGAGATGGAGACCAGTGGTGAATTGAGAGGAACTAAGTCAGATTATAATGATCACGCTCACTACAGCCATAGCAGCGAAGAGGACAGAGGGGCCGAATATTTAAGTGAGATAGAGGAAAGCTTCTTGAAACAGTTGGATGAGAACGCAAAAGGATACTTAGAGGAACCTGCAGGGTATTTGCAAGAGGATTGTGCAAGCCCCAGAAGCTGCTCTGGCAATAACATGGATTCTGCTATGTCATTTACTGATATCAGAACTGGGAATTCCTGCTCGAGTTTCACTAATGGAGAAAAGTCGAGGACAACTCAAACTGCTGTGGGATCAAGCGTTGACACGAGTAGTCCATCGATAGGATGTACAGGCAGCAAAGATGAGGAGATGATGGATAAATATGCAGATTCTGTTTTACCAATGCCACTGTTTCCATCCCATTAG 1392 0.4713 MTGLVMVTKGGGCGGGKETKGAKTTEEEQNQLSLVALLLAALRKSMVACRVDRPDDVISTVHHMEIGWPTNVQHITHVTFDRFNGFLGLPVEFEVEIPGRVPSASVSVFGVSAESMQCSYDSKGNSVPTILLLMQDRLYSQGGLKREGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTEAALLNWAIDLMADVVEDEEHNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTIREREETMTGGYSPMSFHSSDRQSEDEYESQQEMETSGELRGTKSDYNDHAHYSHSSEEDRGAEYLSEIEESFLKQLDENAKGYLEEPAGYLQEDCASPRSCSGNNMDSAMSFTDIRTGNSCSSFTNGEKSRTTQTAVGSSVDTSSPSIGCTGSKDEEMMDKYADSVLPMPLFPSH 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3272 463 ProSiteProfiles CRIB domain profile. 66 79 IPR000095 -
Glsi02g3272 463 SUPERFAMILY GTPase activation domain, GAP 107 285 IPR008936 -
Glsi02g3272 463 PANTHER MKIAA1688 PROTEIN 21 358 IPR044785 GO:0005096
Glsi02g3272 463 Pfam P21-Rho-binding domain 65 94 IPR000095 -
Glsi02g3272 463 Gene3D Rho GTPase activation protein 98 294 IPR008936 -
Glsi02g3272 463 Pfam RhoGAP domain 128 262 IPR000198 GO:0007165
Glsi02g3272 463 FunFam Rho GTPase-activating protein 5 96 289 - -
Glsi02g3272 463 MobiDBLite consensus disorder prediction 294 348 - -
Glsi02g3272 463 MobiDBLite consensus disorder prediction 411 439 - -
Glsi02g3272 463 CDD RhoGAP 128 284 - -
Glsi02g3272 463 MobiDBLite consensus disorder prediction 326 348 - -
Glsi02g3272 463 MobiDBLite consensus disorder prediction 1 26 - -
Glsi02g3272 463 SMART RhoGAP_3 125 288 IPR000198 GO:0007165
Glsi02g3272 463 MobiDBLite consensus disorder prediction 411 443 - -
Glsi02g3272 463 ProSiteProfiles Rho GTPase-activating proteins domain profile. 111 296 IPR000198 GO:0007165
Glsi02g3272 463 Gene3D CRIB domain 61 97 IPR036936 -
Glsi02g3272 463 SMART PBD_5 66 100 IPR000095 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3272 Glsi-ChrGlsi02 80757525 80759628 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3272 02 80757525 80759628 Glsi11g0569 11 3633328 3635872 CCT
Glsi02g3272 02 80757525 80759628 Glsi02g3272 02 80757525 80759628 ECH