Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2901 ATGGAGTCTCTGGCTAAATTGCACCACTCTCGCCAACCGTTGCACCTATCATTCACTCACCACCGTCCGTCATTTCCGGCACCCTTATCCTCAGTCTCGTTCAACTCTCAACCACCGCCGGCTTCGCCTCTTCAACTGTCTTCTTTATCCTTCAGGTTATCATCAATCAGAGCGTCATCCTCACGGACCGATCCCTCATTTCATAAACCTAGAGACATTATAACCCGGTTGCTCCAAACCCTAAAACCCCTTTTGTCACCTGTTGTCGAAACCACCTGTATCACTATAGCAGCATCTGTATTTTTCTTCATGCGTTTTCAGCACAGGCCCGCTATGGCAGCTCCGGTTGTGCCACCCACGGTGGAGTCCACTGAAGAGTCGACTGATAATATTTCGTATGAAGAAAAGGAGAGAATTATTGAAGAGCAATTGAGCAACAATCCCAATGATACCGAAGCTCTTCGATCCCTTATGGAGGTTAAGCTCACAGCGCGTAAAATTGAAGAAGCAATTCAGGTTATAGACCGTTTGATTGAACTTGAACCCCAAGAGTTTGAATGGCCACTGATGAAGGCTCACATGTATATCTATAGTGGTGACTACCGATCGGCCAAAAATGGATTCGAAGATATTCTGAAGAAAGATCCATATCGTGTTGAAGCGTATCATGGCCTTACAATGGCAACTTCGGAATCGAATGAGCCATTGAAGGGTTTGTTGAAGAGGGTCGAAGAAGCAATGGATTTTTGCAAAAAACAAAAGAGGAAGTCAGATGTCAGGGACTTGAAGCTCTTGATTGCGCAGATTAAAGTCATGGATGGAAACTATACTGATGCGCTGAAGGTCTATCAGGAGCTTGTAAAGGAAGAACCAAGAGATTTTAGGCCGTACTTATGTCAGGGCATCATATATACTCTGCTAAAAAAGAAAGATGAAGCCGAGAAACAATTTGAGAAGTTCCGGAGGCTTGTTCCAAAGAATCACCCTTACAAAGAGTATCTTGAGGATAATATGTTTGCAACGAAGTTTTTCGCACAGAAGACAGAGAGGGAGGGAGCTGGTGCAAAAAGCTAA 1074 0.4432 MESLAKLHHSRQPLHLSFTHHRPSFPAPLSSVSFNSQPPPASPLQLSSLSFRLSSIRASSSRTDPSFHKPRDIITRLLQTLKPLLSPVVETTCITIAASVFFFMRFQHRPAMAAPVVPPTVESTEESTDNISYEEKERIIEEQLSNNPNDTEALRSLMEVKLTARKIEEAIQVIDRLIELEPQEFEWPLMKAHMYIYSGDYRSAKNGFEDILKKDPYRVEAYHGLTMATSESNEPLKGLLKRVEEAMDFCKKQKRKSDVRDLKLLIAQIKVMDGNYTDALKVYQELVKEEPRDFRPYLCQGIIYTLLKKKDEAEKQFEKFRRLVPKNHPYKEYLEDNMFATKFFAQKTEREGAGAKS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2901 357 Pfam Tetratricopeptide repeat 270 326 - -
Glsi02g2901 357 SUPERFAMILY TPR-like 132 325 IPR011990 GO:0005515
Glsi02g2901 357 ProSiteProfiles TPR repeat profile. 151 184 IPR019734 GO:0005515
Glsi02g2901 357 SMART tpr_5 294 327 IPR019734 GO:0005515
Glsi02g2901 357 SMART tpr_5 151 184 IPR019734 GO:0005515
Glsi02g2901 357 SMART tpr_5 260 293 IPR019734 GO:0005515
Glsi02g2901 357 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 52 331 - -
Glsi02g2901 357 Gene3D Tetratricopeptide repeat domain 120 344 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2901 Glsi-ChrGlsi02 78028003 78029076 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2901 02 78028003 78029076 Glsi11g0858 11 5414024 5415112 CCT