Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2756 ATGAACAGAAAAGAGGGTACGAGAGGAGAAGCAAGCAAAGCATCCAGTTCACTTGCCTTCTCCATGACTGAAATTTTCTGCTTTTCCCAGTCCCTTGGTAAAGTGCTTCAAGTTCTTTGGGTTATGCTTGGGGTACCTAGCTCCTACGAACATGGAATATCTAATCTTACTCACCTTTCTTCTATCTTCATGGCTCTCGTTCTCTCTGTTATTTTAATCTTCATGGTCCCTTCAAGCAATGCCTATTGGCCACCTTCACCTGGCTACTGGCCAAGTTCCAAATTCAGGTCTATGAGCTTTTACAAAGGATTTAGAAACCTCTGGGGTCCTCAGCACCAAGGACTAAACGAAAATGCATTAACAATATGGCTTGATAGAAACTCAGGAAGTGGCTTCAAGTCCGTTCGTCCATTTCGATCTGGGTACTTTGGTGCTTCCATTAAACTCCAACCTGGCTATACAGCAGGAGTTATAACATCTCTCTATCTTTCGAACAATGAAGCACATCCGGGTTTCCATGATGAAGTGGACATTGAATTTCTTGGGACGACATTTGGAAAGCCTTACACTTTGCAGACCAATGTTTATATAAGAGGGAGTGGGGATGGCAAAATTATAGGCAGAGAGATGAAATTCCATCTCTGGTTTGATCCTACCAAAGATTTTCATCACTATGCTATACTGTGGAGTCCTAAGGAAATCATATTCCTTGTGGATGATGTGCCCATAAGGAGGTACCCGAAGAAGATTGCTGCAACCTTTCCCCTGAGGCCAATGTGGCTTTATGGTTCAATATGGGATGCCTCATCATGGGCAACTGAAGATGGAAAGTACAAAGCTGATTACAGATACCAGCCTTTTGTTGCAAGGTACACCAACTTCAAGGCTAGTGGTTGCTCAACCTATGCCCCTGCACGGTGCCACCCAGTCTCAGCCTCGCCATATGGGTCTGGTGGCCTTACCAGACAACAATACAACGCCATGAGATGGGTGCAAAGATACCACTTGGTTTATAACTATTGCAGGGATCCCAAAAGAGACCACAGACTAACACCTGAGTGCTGGGGTTCGAAGTGA 1077 0.4466 MNRKEGTRGEASKASSSLAFSMTEIFCFSQSLGKVLQVLWVMLGVPSSYEHGISNLTHLSSIFMALVLSVILIFMVPSSNAYWPPSPGYWPSSKFRSMSFYKGFRNLWGPQHQGLNENALTIWLDRNSGSGFKSVRPFRSGYFGASIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFHLWFDPTKDFHHYAILWSPKEIIFLVDDVPIRRYPKKIAATFPLRPMWLYGSIWDASSWATEDGKYKADYRYQPFVARYTNFKASGCSTYAPARCHPVSASPYGSGGLTRQQYNAMRWVQRYHLVYNYCRDPKRDHRLTPECWGSK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2756 358 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 38 291 IPR000757 GO:0004553|GO:0005975
Glsi02g2756 358 SUPERFAMILY Concanavalin A-like lectins/glucanases 122 342 IPR013320 -
Glsi02g2756 358 Pfam Glycosyl hydrolases family 16 102 283 IPR000757 GO:0004553|GO:0005975
Glsi02g2756 358 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 97 354 IPR044791 GO:0004553
Glsi02g2756 358 Gene3D - 80 354 - -
Glsi02g2756 358 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 318 354 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Glsi02g2756 358 FunFam Xyloglucan endotransglucosylase/hydrolase 87 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2756 Glsi-ChrGlsi02 76985708 76988566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2756 64 354 Glycoside Hydrolase AT3G44990 64.261 9.92e-140 397
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2756 02 76985708 76988566 Glsi11g0997 11 6291629 6293085 CCT
Glsi02g2756 02 76985708 76988566 Glsi02g2756 02 76985708 76988566 ECH