Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2355 ATGCTTTTGTTATCGAACCAAGACTATAACTTAACAATTGCTATTGCAATGACAGGGTCACGCGACACGTCTACCTTTCTCGGAGCTGCCTCCGAACACTCCGTACCGGCGGCGGATACTGTAGTGAGGTGTTCAAAGATGACGGTCACGCCTAAGATCTCCGTTAACGATGGGAACCTGGTTGTCCATGGGAAGACCATACTGACTGGAGTGCCAGACAACATTGTGCTGACTCCAGGAGCGGGAGGGGGCCTAGTTGCTGGTGCATTTGTTGGTGCCACAGCTTCCCACAGCAAAAGTCTTCATGTCTTCCCCATTGGTGTCCTAGAGGGTCTCCGGTTCATGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTCAGAGAATGGGAACTTGTGGGAGGGATATCCCTTTGGAGACCCAATTCATGCTGATAGAGAGCAAAGATAGTGAAGCTACTGATCAGGATAATTCTCCAACAATCTACACCGTCTTGCTTCCTCTTCTGGAAGGCCAGTTCCGTGCTGTTCTACAAGGAAATGACAAAAATGAGATAGAGATTTGCCTTGAGAGTGGAGATAAAGCTGTTGAGACTAATCAAGGTCTTCACTTGGTCTACATGCATGCTGGGACTAATCCCTTTGAAGTCATTAACCAAGCTGTCAAGGCTTTGGAAAAACACCTGAAAACATTCCTTCATCGTGAGAAGAAAAGATTGCCTTCTTTTCTTGACTGGTTTGGTTGGTGCACATGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTGTTGAAGAAGGCCTAAAAAGCCTATCGGAGGGTGGTACACCACCACGGTTCCTTATCATAGATGATGGCTGGCAACAGATTGAAAGTAAAACAGAGCATGCTGATTGTGTCGTACAAGAAGGAGCGCAGTTTGCCAGTAGGTTGGCTGGTATAAAAGAAAACACTAAATTTCAGAAGAATGGACAGAGCAATGAACAGATCTCAGGCCTGAAGCATGTTGTAGATAAAGCGAAGCAAGATCACAATGTGAATTATGTTTATGTATGGCATGCTCTAGCTGGTTATTGGGGTGGAGTGAAGCCAGCAGCTAGTGGCATGGAACACTATGACACTGCCTTAGCGTACCCCGTACAGTCTCCAGGTGTACTAGGAAACCAACCAGACATTGTAATGGACAGCTTGGCTGTACATGGCCTGGGTCTAGTGCACCCAAAGAAGGTTTTCGATTTCTACAACGAGCTCCATGCTTACTTAGCTTCATGCGGAGTAGATGGTGTAAAAGTTGATGTGCAGAACATCATCGAGACACTTGGTGCTGGACATGGTGGTAGAGTCTCACTCACGCGCAGCTATAGTCAGGCACTTGAGTCCTCGGTTGCTCGTAACTTTCCTGATAATGGATGCATTGCATGTATGTGTCACAATACCGATGGGCTTTATAGTGCCAAGCAAACTGCTGTTGTGAGAGCATCTGATGACTTTTACCCACATGATCCTGCTTCCCACACTATCCATATATCATCTGTAGCGTACAACACACTTTTCCTTGGAGAATTCATGCAGCCTGACTGGGATATGTTCCATAGTTTGCACCCGGCAGCCGAGTATCATGCAGCAGCTCGTGCAGTTGGTGGGTGTGCAATTTATGTCAGTGATAAGCCAGGCAACCACAATTTCGAACTCCTTAAGAAGCTGGTTCTCCCCGATGGATCAGTTCTCCGTGCTCAGTTACCTGGCAGGCCCACTCGTGATTCTCTCTTTAATGATCCAGCCAGAGATGGGACCAGCTTGCTCAAAATGTGGAACTTGAACAAATGCTCTGGAGTGGTTGGTATATTTAACTGTCAAGGTGCCGGGTGGTGCAAGGTAGAGAAGAAGACCCTTATCCATGATGCATCTCCTGGTACACTCACTGGCTCTGTTTGTGCCTTTGATGTTGACCTCATCTCTCAAGTTGCTGGTGCTGATTGGGACGGCGAGGCTATTGTTTATGCCTATAGATCAGGTGAGGTAATTCGGCTACCTAAAGGTGCATCAGTGCCAGTGACACTGAGAGTGCTGGAGTATGAACTTTTCCATTTCTGTCCAATCAAGGAAATCGCACCAAGTATTTCGTTTGCACCAATAGGACTACTGGATATGTTCAACACTGGAGGAGCTGTGGAGCAGGTTGAAATCCACAAAAGTTCTGACAAAGAACCAGAATTATTTGATGGTGAGGTTCAGTCCGAGTTGACCACTTCTCTCAGTTCTCACCGATCAGCAACAGCAACTATTGCCCTCATGGTCAGAGGAAGTGGAAGATTTGGGGTGTACTCCTCCCAGTGCCCACTGAAGTGTGTTGTAGGGGACGCCGAAACCGAGTTCAACTATGACACAGCGACTGGGTTGATGAGCTTCACCATCCCAGTTCCTGCAGAGGATATGTACAGATGGTCCATAGAGATCCAAGTTTGA 2463 0.471 MLLLSNQDYNLTIAIAMTGSRDTSTFLGAASEHSVPAADTVVRCSKMTVTPKISVNDGNLVVHGKTILTGVPDNIVLTPGAGGGLVAGAFVGATASHSKSLHVFPIGVLEGLRFMCCFRFKLWWMTQRMGTCGRDIPLETQFMLIESKDSEATDQDNSPTIYTVLLPLLEGQFRAVLQGNDKNEIEICLESGDKAVETNQGLHLVYMHAGTNPFEVINQAVKALEKHLKTFLHREKKRLPSFLDWFGWCTWDAFYTDVTAEGVEEGLKSLSEGGTPPRFLIIDDGWQQIESKTEHADCVVQEGAQFASRLAGIKENTKFQKNGQSNEQISGLKHVVDKAKQDHNVNYVYVWHALAGYWGGVKPAASGMEHYDTALAYPVQSPGVLGNQPDIVMDSLAVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGAGHGGRVSLTRSYSQALESSVARNFPDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPHDPASHTIHISSVAYNTLFLGEFMQPDWDMFHSLHPAAEYHAAARAVGGCAIYVSDKPGNHNFELLKKLVLPDGSVLRAQLPGRPTRDSLFNDPARDGTSLLKMWNLNKCSGVVGIFNCQGAGWCKVEKKTLIHDASPGTLTGSVCAFDVDLISQVAGADWDGEAIVYAYRSGEVIRLPKGASVPVTLRVLEYELFHFCPIKEIAPSISFAPIGLLDMFNTGGAVEQVEIHKSSDKEPELFDGEVQSELTTSLSSHRSATATIALMVRGSGRFGVYSSQCPLKCVVGDAETEFNYDTATGLMSFTIPVPAEDMYRWSIEIQV 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2355 820 PANTHER - 47 818 IPR008811 -
Glsi02g2355 820 Pfam Raffinose synthase or seed imbibition protein Sip1 53 803 IPR008811 -
Glsi02g2355 820 Gene3D Aldolase class I 244 560 IPR013785 -
Glsi02g2355 820 SUPERFAMILY (Trans)glycosidases 242 572 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2355 Glsi-ChrGlsi02 73861148 73869073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2355 47 603 Glycoside Hydrolase AT3G57520 82.765 0.0 995
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2355 02 73861148 73869073 Glsi11g1343 11 8427712 8433017 CCT
Glsi02g2355 02 73861148 73869073 Glsi02g2355 02 73861148 73869073 ECH