Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1074 ATGAGCTGGACCGGAGGAGATTGGATGTGTGGCGCTTGCCAGCACATAAATTTCAAGAAACGGGATGCATGCCAACGTTGTGGATACCCCAAGTTTGAAGGGCCTGACCCATCAACTTATGGCTACAATAGGACTGAAGCGTTGGCAGGGGACTGGTTTTGCACCGCCATGAACTGTGGAGCTCACAACTATGCCAGCCGATCAAGCTGCTATAGATGTGGTGCATCCAAAGATGATTATGCTTCTGGATATGGGGGAAACGTGATGGCCTCTGGAGGATATGGATCAGATTCCAGTTTTCCCCCGGGATGGAAGAGTGGCGATTGGATTTGCACTAGAATTGGCTGTGGAGTACACAACTATGCTAGCAGGTCAGAATGCTTCAAGTGCAAAACACCAAGAGATTTTGGTGAGAAAAGTTTAGTCTTCAGGATGTTTTCTCTGTTTAGCTATAAAATGGTTTGA 465 0.471 MSWTGGDWMCGACQHINFKKRDACQRCGYPKFEGPDPSTYGYNRTEALAGDWFCTAMNCGAHNYASRSSCYRCGASKDDYASGYGGNVMASGGYGSDSSFPPGWKSGDWICTRIGCGVHNYASRSECFKCKTPRDFGEKSLVFRMFSLFSYKMV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1074 154 FunFam Ran-binding zinc finger protein 98 136 - -
Glsi02g1074 154 SMART zf_4 50 76 IPR001876 -
Glsi02g1074 154 SMART zf_4 107 133 IPR001876 -
Glsi02g1074 154 SMART zf_4 6 30 IPR001876 -
Glsi02g1074 154 PANTHER ZINC FINGER PROTEIN 44 138 - -
Glsi02g1074 154 Pfam Zn-finger in Ran binding protein and others 6 31 IPR001876 -
Glsi02g1074 154 Pfam Zn-finger in Ran binding protein and others 49 77 IPR001876 -
Glsi02g1074 154 Pfam Zn-finger in Ran binding protein and others 105 134 IPR001876 -
Glsi02g1074 154 ProSiteProfiles Zinc finger RanBP2 type profile. 4 33 IPR001876 -
Glsi02g1074 154 ProSitePatterns Zinc finger RanBP2-type signature. 52 73 IPR001876 -
Glsi02g1074 154 SUPERFAMILY Ran binding protein zinc finger-like 100 136 IPR036443 -
Glsi02g1074 154 Gene3D - 1 35 - -
Glsi02g1074 154 Gene3D - 42 79 - -
Glsi02g1074 154 Gene3D - 98 136 - -
Glsi02g1074 154 SUPERFAMILY Ran binding protein zinc finger-like 43 79 IPR036443 -
Glsi02g1074 154 SUPERFAMILY Ran binding protein zinc finger-like 3 34 IPR036443 -
Glsi02g1074 154 ProSiteProfiles Zinc finger RanBP2 type profile. 105 136 IPR001876 -
Glsi02g1074 154 ProSiteProfiles Zinc finger RanBP2 type profile. 48 79 IPR001876 -
Glsi02g1074 154 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
Glsi02g1074 154 ProSitePatterns Zinc finger RanBP2-type signature. 109 130 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1074 Glsi-ChrGlsi02 7196618 7197611 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi13g0963 13 27869310 27870608 Glsi02g1074 02 7196618 7197611 CCT