Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0778 ATGAAGAGAGGCAGAGTAGAAAAATTAGATACTTTTGTGTCATTAACCAGGCAGAGATCCATTCAGATTCTGATCGGATTTGGACTTCTGTATATACTGTTGGTCACGCTGGAAATTCCCTTTTTGTTCAAAACTGGTTTCAGTCTTGTGTCTCAGGAGTTCTTGACTGGTCCTCCAAGCCTGGAGAGCCAGAAGGACTTTGAAGAAAGGGAAGCTCCAATTGGCCCGCTCGAAATAGTTTCTCAAAACTCTGACCAACCCACTCAGAGACAATTAATTGAGCACAAGATTTTGTCCGGCTTGATCTTCGATGATATTACATTTGATTTGAGGGGTAGGGATGGGTCCCCGGAGCTTTACAAGTCAGCAAAGAATGCTTGGGAAGTTGGCAAGAAGATTAGGGAAGAGTTGGAAACGGGGAACCTTAGGACAGTCGATGGGAAGTCCGAGAACCGATCAGAATCATGTCCGGATTCGATTTCGCTATCTGGGTCACAGTTTTTGGCTCATGGGTTAGTCATGGTTCTTCCTTGTGGACTGACATTGGGGTCCCACATAACGGTTGTAGGAAAGCCGTCGGCAGCTCGCCAACATGATGTTAATCAAGTGATGGTGTCGCAGTTTATCATGGAGTTGCAGGAGTTGAAGACTTGGGACGGCGAGGATCCCCCAAGAATTTTGCATTATAACCCCAGATTGAAGGGAGACTGGAGTGGGAAGCCTGTAATTGAGCTAAACAGTTGTTATAGAATGCATTGGGGTTCGGCGCAGCGGTGTGATGGATGGAAATCAAAGGCTGGTGAAGAGACTGTTGATGGGCTGGTGAAATGTGAGAAGTGGATTCGGAATGATGACAGTCACGCAAAGGAGACTAAGGCAACATGGTGGTTGAATAGATTTATAGGCCGGACGAGAAAAGTAACAGTTGACCGGCCCTTCCCATTTTCCGAGAACAAGCTATTTGTTCTTACTCTTAGTGCTGGATTGGAGGGCTATCATGTTACTGTTGATGGGAAGCACGTGACCTCTTTTCCTTATCGCACTGGTTTTACTCTCGAAGATGCCACAGGGCTTTCTTTGGGTGGGGACATTGATGTCCACTCTGTATTTGCTGCTTCTTTGCCTTCATCACATCCTAGTTTCGCTCCAGAGCAGCATCTTGAATTTTCAAGCAGATGGCGTGCCCCACCACTTCCTGACTTTGACGTAGAATTGTTCATTGGAGTCCTTTCTGCAGGAAACCATTTTGCCGAGAGAATGGCTGTAAGGAAGTCATGGATGCAGCATAGTCTTATCAAATCCCTTAGAGTGGTGACTCGTTTCTTTGTAGCACTGCATTCAAGAAAAGAAGTGAATATAGGGTTAAAGAAGGAAGCAGAATTTTTCGGTGATATTGTTTTAGTTCCTTACCTGGATAACTATGACCTTGTTGTGTTGAAAACTGTGTCCATATGTGAATATGGGGTTCGCACAGTTTCTGCTAAGTATATCATGAAGTGTGATGATGACACTTTTGTAAGAGTGGATGCTGTCATAAATGAAGCAAGGAAGGTTCCGGATGATAGGAGCTTTTATTTTGGCAACATAAATCGTTTCCACAAACCCTTGCGCCATGGTAAATGGGCCGTGACATTCGAGGAGTGGCCAGAAGAGCGTTACCCGCCATATGCTAACGGACCGGGTTATATTTTGTCTTCCGACATTGCACACTCCGTCATATCTGAATTTGAGAGGCATAAATTAAGGTTGTTTAAGATGGAAGATGTGAGTATGGGAATGTGGGTAAAGCAATTTAACAGCTCGAAACCAGTTCATTATTTACATAGCTTAAAGTTCTGCCAGTTTGGCTGCATAGAAAACTATTACACTGCCCATTACCAATCGCCAAGGCAGATGAAGTGCCTCTGGGATAAATTGCAAAGGCAGACAACTCCTCAGTGCTGCAATACGAGATGA 1956 0.4463 MKRGRVEKLDTFVSLTRQRSIQILIGFGLLYILLVTLEIPFLFKTGFSLVSQEFLTGPPSLESQKDFEEREAPIGPLEIVSQNSDQPTQRQLIEHKILSGLIFDDITFDLRGRDGSPELYKSAKNAWEVGKKIREELETGNLRTVDGKSENRSESCPDSISLSGSQFLAHGLVMVLPCGLTLGSHITVVGKPSAARQHDVNQVMVSQFIMELQELKTWDGEDPPRILHYNPRLKGDWSGKPVIELNSCYRMHWGSAQRCDGWKSKAGEETVDGLVKCEKWIRNDDSHAKETKATWWLNRFIGRTRKVTVDRPFPFSENKLFVLTLSAGLEGYHVTVDGKHVTSFPYRTGFTLEDATGLSLGGDIDVHSVFAASLPSSHPSFAPEQHLEFSSRWRAPPLPDFDVELFIGVLSAGNHFAERMAVRKSWMQHSLIKSLRVVTRFFVALHSRKEVNIGLKKEAEFFGDIVLVPYLDNYDLVVLKTVSICEYGVRTVSAKYIMKCDDDTFVRVDAVINEARKVPDDRSFYFGNINRFHKPLRHGKWAVTFEEWPEERYPPYANGPGYILSSDIAHSVISEFERHKLRLFKMEDVSMGMWVKQFNSSKPVHYLHSLKFCQFGCIENYYTAHYQSPRQMKCLWDKLQRQTTPQCCNTR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0778 651 FunFam Hydroxyproline O-galactosyltransferase GALT2 286 370 - -
Glsi02g0778 651 Pfam Galactoside-binding lectin 173 370 IPR001079 GO:0030246
Glsi02g0778 651 Pfam Galactosyltransferase 418 598 IPR002659 GO:0006486|GO:0016020|GO:0016758
Glsi02g0778 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 173 370 IPR013320 -
Glsi02g0778 651 Gene3D - 281 370 - -
Glsi02g0778 651 SMART Gal_bind_lectin_2 176 371 IPR001079 GO:0030246
Glsi02g0778 651 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 340 600 IPR002659 GO:0006486|GO:0016020|GO:0016758
Glsi02g0778 651 FunFam Hydroxyproline O-galactosyltransferase 396 639 - -
Glsi02g0778 651 Gene3D - 169 277 - -
Glsi02g0778 651 CDD GLECT 176 370 IPR001079 GO:0030246
Glsi02g0778 651 Gene3D - 401 650 - -
Glsi02g0778 651 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 172 372 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0778 Glsi-ChrGlsi02 5035347 5038900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0778 5 651 Glycosyltransferase AT1G74800 64.199 0.0 887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0778 02 5035347 5038900 Glsi13g1208 13 29556840 29560449 CCT
Glsi02g0778 02 5035347 5038900 Glsi02g0778 02 5035347 5038900 ECH