Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0701 ATGGCTGGCCTGGCGGAAGATAAAGGTCTGGGAATTTGCGGTATAAAGGATCCGGAAAGTGAGGAGAAGAACAAACGCACACAGAAGACCGTGGTCAAGGGAGAGGGTGGTCAAGGGGAGAGAGATATGGCACCTACGGCCGGAAATTCAATTCACAGGTCAAGTTCACGGCCCCAGCTCGATGTTAGCAAAGCTGAAATCCAAGGGAATGTTGGGGAGAAGTATCCCACAATTTTGCTACCCAATCAATCTGATGATATTTCTCACCTGGCAGTTGACATTGGAGGATCTCTGATAAAGTTGGTATACTTTTCAAGACACGAAGACCAATTAGTCAATGATAAAAGGAAGAGAAGTATGAAGGAGCGACTGGGAATTTCCAATACTAACAGGAGAAGCTATCCTATTCTTGGTGGGAGACTTCATTTTGTGAAGTTTGAGACGAGCAAGATTAATGAGTGCTTAGATTTCATTGACTCAAAGCAGCTTCACTGTGGTGGGTTGGAATCGCGTTCCTCTGATACTGTGGCTGACCGGAATGCCATAATTAAGGCTACTGGTGGTGGAGCCTACAAGTTCGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGACGAAATGGATTGTCTCGTGGCAGGAGTAAATTTCTTGCTTAAGGCAATTCGTCATGAAGCTTTCACGCATATGGAGGGCCGAAAAGAGTTTGTTCAAATTGACCCCAATGATATGTTTCCTTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGAGATGGGAAATACGAGAGGGTCAGTGGCACAAATGTTGGTGGAGGTACTTATTGGGGCTTGGGAAGACTTCTAACAAAGTGCAAGAGTTTTGATGAGTTGCTTGAGCTGAGTCAAAAAGGAGATAATAGTGCCATTGATATGCTTGTTGGGGACATTTATGGTGGTATGGACTACTCTAAGATTGGCCTATCAGCTTCAACCATTGCTTCAAGTTTTGGCAAGGCTATATCAGAAAAAAAGGAGCTGGAAGACTACAGACCTGAAGATATCTCGCTCTCTCTTCTACGGATGATTTCATACAATATTGGCCAGATATCTTATTTAAATGCATTGCGATTTGGGCTGAAGCGGATCTTTTTTGGAGGATTTTTTATACGGGGTCATGCCTATACTATGGACACTATTTCTTTTGCAGTTCAATTCTGGTCTAAAGGTGCAGCACAAGCAATGTTCCTGCGACATGAAGGATTCCTGGGAGTTTTAGGTGCATTTATGAGCTATGAAAAGCATGGTTTAGATGACCTTATGGTGCATCAGTTAGTTGAAAGATTCCCAATGGGGGCTCCATATACAGGAGGAAAGATCCATGGCCCACCACTTGGAGATTTGAATGAGAAGATTTCATGGATGGAGAAGTTTTTGCGGAAGGGAACTGAGATAACTGCACCTGTACCAATGACTCCACCTGGAACTACTGGACTTGGGGGTTTTGAAGTTCCTCTGTCAAAAGGAAGTACTCTGCGTTCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACTTTGGAGGTGTTTCCATTATTAGCAGACCCTAAAATGTATGAGCCTAATACTATTGATCTCTCAGATCACAGTGAATTAGAATATTGGTTCACCATTTTGTCAGAGCACTTGCCAGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCTCACTTGGCAAGGTTGATGGAGGAACCTGCTGCATATGGTAAGTTAGGCTTGGCCAATCTATTGGAAATGAGGGAAGAGTGCTTGAGAGAATTCCAGTTTGTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAGGCTTCACTTGCTGTATTACCTGATTTGTTAATGGAGCTTGACGGTATGGATGAGGAAGCAAGACTACTTACTCTGATTGAAGGTGTTCTTGCTGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTTTATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCAGAGACCTTGGCGGGTGGATAATTTTGATGTCTTCAAAGAGAGAATGTTAGGGAATGGGGACAGTAAACCTCCCCCACACAGAAGAGCTTTGCTGTTTGTGGATAATTCAGGTGCTGACATTGTTCTAGGGATGCTTCCCCTGGCACGGGAGCTCCTTCGTCGTGGAACTGAAGTGGTTCTGGTTGCAAATTCCCTACCTGCTTTAAATGATGTAACTGCAATGGAGGTTCCTGACATTGTAGCTGAGGCTGCCAAGCACTGTGACATTCTTAGGCGAGCTGCTGAAGCAGGAGGCTTACTTGTGGATGCAATGATTAACACCTTAGATGGGTCTAAAGAAAATTCGTCTTCAGCTCCCTTGATGGTTGTTGAGAATGGGTGTGGGAGTCCATGTATAGACTTAAGACAAGTCAGCTCTGAGCTGGCTGCTGCTGCAAAAGATGCGGACTTGATAATTTTGGAAGGTATGGGTAGAGCTCTTCATACCAACCTCAATGCTCGCTTTAAGTGCGATGCTTTGAAGCTCGCAATGGTGAAAAACCAGAGGTTGGCTGAAAAGTTGGTTAAAGGGAACATATACGACTGTGTTTGCAAATATGAGCCTGCTAGTTGA 2730 0.4359 MAGLAEDKGLGICGIKDPESEEKNKRTQKTVVKGEGGQGERDMAPTAGNSIHRSSSRPQLDVSKAEIQGNVGEKYPTILLPNQSDDISHLAVDIGGSLIKLVYFSRHEDQLVNDKRKRSMKERLGISNTNRRSYPILGGRLHFVKFETSKINECLDFIDSKQLHCGGLESRSSDTVADRNAIIKATGGGAYKFADLFKERLGVSLDKEDEMDCLVAGVNFLLKAIRHEAFTHMEGRKEFVQIDPNDMFPYLLVNIGSGVSMIKVDGDGKYERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNSAIDMLVGDIYGGMDYSKIGLSASTIASSFGKAISEKKELEDYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGAAQAMFLRHEGFLGVLGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLRKGTEITAPVPMTPPGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKMYEPNTIDLSDHSELEYWFTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLMELDGMDEEARLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDNFDVFKERMLGNGDSKPPPHRRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMEVPDIVAEAAKHCDILRRAAEAGGLLVDAMINTLDGSKENSSSAPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNARFKCDALKLAMVKNQRLAEKLVKGNIYDCVCKYEPAS 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0701 909 Pfam Damage-control phosphatase ARMT1-like domain 616 895 IPR002791 -
Glsi02g0701 909 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 710 907 - -
Glsi02g0701 909 MobiDBLite consensus disorder prediction 12 30 - -
Glsi02g0701 909 MobiDBLite consensus disorder prediction 1 61 - -
Glsi02g0701 909 NCBIfam type II pantothenate kinase 89 432 IPR004567 GO:0004594|GO:0005524|GO:0015937
Glsi02g0701 909 FunFam Pantothenate kinase 1 89 227 - -
Glsi02g0701 909 Gene3D - 546 631 IPR035073 -
Glsi02g0701 909 Gene3D - 311 422 - -
Glsi02g0701 909 FunFam Pantothenate kinase 2 228 413 - -
Glsi02g0701 909 SUPERFAMILY Actin-like ATPase domain 87 228 IPR043129 -
Glsi02g0701 909 PIRSF PanK_long 43 909 IPR015844 GO:0004594|GO:0015937
Glsi02g0701 909 Pfam Fumble 89 431 IPR004567 GO:0004594|GO:0005524|GO:0015937
Glsi02g0701 909 Gene3D - 81 240 - -
Glsi02g0701 909 PANTHER PANTOTHENATE KINASE 59 801 IPR004567 GO:0004594|GO:0005524|GO:0015937
Glsi02g0701 909 FunFam Pantothenate kinase 2 545 631 - -
Glsi02g0701 909 FunFam Pantothenate kinase 2 81 241 - -
Glsi02g0701 909 SUPERFAMILY Actin-like ATPase domain 200 433 IPR043129 -
Glsi02g0701 909 SUPERFAMILY AF1104-like 525 907 IPR036075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0701 Glsi-ChrGlsi02 4555283 4566568 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0701 02 4555283 4566568 Glsi13g1294 13 30350241 30377021 CCT
Glsi02g0701 02 4555283 4566568 Glsi13g1294 13 30350241 30377021 ECH
Glsi02g0701 02 4555283 4566568 Glsi02g0701 02 4555283 4566568 ECH