Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0693 ATGCAATCGTTAAGTATTAAGGCTTTCATGGATTTGCGGTTATCGGGTCTGGGAGGCTCCGGTTTCGGGGAATCCGAAGCTGGGGTGAGGAGGCGATGGGTGAGTAGCGGAAAGCCCGGGAGAAGAAATGGGATCGTAGCGTGTGCTACTGCAGAAAGGAATGGGAATGGTAGGGGAGAGAGTCGGAGTATGAGTCAAAGTCCAACTCCAAGTCCGAGCTCGTTTCTTTCTTGGGCCCATAACTACGCCCTCTTAAAGCAGCAATTGGAATTAGCTGCCAAATCCGAGGACTACAAAGAAGCAGCAAGGATTCGGGATTCACTAAAATTATTTGAAGACGAGGAGCCAGTTCTGCGTCTGCGAAGATTAATGAAGGAAGCAATTGCTGATGAGAGATTTGTGGATGCAGCTAGATATCGAGATGAGCTAAAAGAAATTGCCCCGTACTCTCTCTTGAAATGTTCCAGTGATGCTTCAACCATGGGAATCAGGGTTCAAGTTAGAAGTATATATACAGAGGGTAGAAGTCAACCTTCAAAAGGGCAACACTTCTTTGCGTATAGAATAAGAATTACCAATAACTCAGACCGCCCTGTTCAACTTCTTAGAAGGCATTGGATTACAACTGATGGTAATGGGAAAACAGAAAATCTCTGGGGGATTGGGGTTGTCGGTGAACAGCCAGTTATGCTTCCTAAGACTGGTTTTGAGTACTCTTCAGCATGCCCATTAAGCACACCGAGTGGTAGAATGGAAGGTGACTTTGAGATGATCTACGTTGATAGAATAGGCTCACCATCATTTAATGTGGCTATTGCCCCCTTTTCACTATCTCTTCTTGGAGATGATGATGGTCATACCATTTGA 867 0.4533 MQSLSIKAFMDLRLSGLGGSGFGESEAGVRRRWVSSGKPGRRNGIVACATAERNGNGRGESRSMSQSPTPSPSSFLSWAHNYALLKQQLELAAKSEDYKEAARIRDSLKLFEDEEPVLRLRRLMKEAIADERFVDAARYRDELKEIAPYSLLKCSSDASTMGIRVQVRSIYTEGRSQPSKGQHFFAYRIRITNNSDRPVQLLRRHWITTDGNGKTENLWGIGVVGEQPVMLPKTGFEYSSACPLSTPSGRMEGDFEMIYVDRIGSPSFNVAIAPFSLSLLGDDDGHTI 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0693 288 PANTHER OS05G0170800 PROTEIN 38 284 - -
Glsi02g0693 288 ProSiteProfiles ApaG domain profile. 157 284 IPR007474 -
Glsi02g0693 288 ProSiteProfiles UVR domain profile. 114 149 IPR001943 GO:0005515
Glsi02g0693 288 MobiDBLite consensus disorder prediction 44 72 - -
Glsi02g0693 288 MobiDBLite consensus disorder prediction 56 72 - -
Glsi02g0693 288 Gene3D ApaG domain 153 286 IPR036767 -
Glsi02g0693 288 Pfam ApaG domain 175 258 IPR007474 -
Glsi02g0693 288 Pfam UvrB/uvrC motif 85 112 IPR001943 GO:0005515
Glsi02g0693 288 Pfam UvrB/uvrC motif 119 146 IPR001943 GO:0005515
Glsi02g0693 288 SUPERFAMILY ApaG-like 160 278 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0693 Glsi-ChrGlsi02 4507495 4510372 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0693 02 4507495 4510372 Glsi13g1301 13 30420448 30423816 CCT
Glsi02g0693 02 4507495 4510372 Glsi02g0693 02 4507495 4510372 ECH