Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2157 ATGGTGTGCGGGAAGAGCTGCGGAAAAAGCGATGGTTCAGGATCGGAGCCGGTGTACCTGAACGTGTACGATCTCACCCCCATCAACGGCTACGCCTACTGGTTCGGACTCGGAGTGTACCATTCAGGGGTGCAAGTGCACGGCGTAGAGTACGCCTTCGGGGCGCACGAGTACTCGTCGACGGGGATATTCGAAGGGGAACCGAAGAGGTGCGAAGGGTTCAGGTTCAGGAAGACGGTGGTGATTGGGAAGACGGACATGGGGCCCAGTGAGGTGAGGGCAGTGATGGAGGAGCTCGGTGGAGAGTACAGAGGGAATGCCTACAACTTGATCACCAAGAACTGCAACCATTTCTGCAACCATGCCTCTCTTAGGCTCACCGGAAATCCTATTCCCAGTTGGGTCAATCGCCTTGCCAGGATAGGGTTTTTGTGCAATTGTGTTCTTCCGGTGACTTTGAACTCAACTAGGGTTAGGCACCACAGAATAGAAGAGAAGCAAAGTGAAGGAGAGAAGCAAGTATCAACTCCAACAAGTGGCACCAATAACAAGCTTTCCTCTTCAAATTCAACATCCTCTTCCTCATCATCATCCACCCCAGCTGCTTCAACCCCCATACTGCGCAGGGGAAGGAGTAGAACCAGGCGTCCCCGTCCTCCATCTTCGCCTTTGATTCCTGCCTCTTCTTCATCTTGA 696 0.5316 MVCGKSCGKSDGSGSEPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGVEYAFGAHEYSSTGIFEGEPKRCEGFRFRKTVVIGKTDMGPSEVRAVMEELGGEYRGNAYNLITKNCNHFCNHASLRLTGNPIPSWVNRLARIGFLCNCVLPVTLNSTRVRHHRIEEKQSEGEKQVSTPTSGTNNKLSSSNSTSSSSSSSTPAASTPILRRGRSRTRRPRPPSSPLIPASSSS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2157 231 MobiDBLite consensus disorder prediction 163 231 - -
Dod10g2157 231 SMART DUF862_2a 16 154 IPR008580 GO:0008233
Dod10g2157 231 MobiDBLite consensus disorder prediction 172 205 - -
Dod10g2157 231 Pfam PPPDE putative peptidase domain 17 150 IPR008580 GO:0008233
Dod10g2157 231 ProSiteProfiles PPPDE domain profile. 16 153 IPR008580 GO:0008233
Dod10g2157 231 Gene3D PPPDE domains 12 171 IPR042266 -
Dod10g2157 231 PANTHER DESUMOYLATING ISOPEPTIDASE 10 231 IPR008580 GO:0008233
Dod10g2157 231 PANTHER F23A5.4 PROTEIN 10 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2157 Dod-Chr10 43442220 43444398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2157 K22763 - gmx:100817929 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2444 06 53145979 53149067 Dod10g2157 10 43442220 43444398 ECH
Dod10g2157 10 43442220 43444398 Dod10g2157 10 43442220 43444398 ECH