Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2444 ATGCTGTGCCGGAAGAGTTCACGAAACGGCGTCGCTTCAGGGTCGGTTCCGGTGTACCTGAACGTATACGATCTCACACCCATCAACGGTTACGCTTACTGGTTCGGCCTCGGAGTGTACCATTCCGGCGTTCAAGTGCACGGTGTTGAGTATGCATTCGGGGCTCATGAGTACTCATCGACGGGGATATTCGAAGGGGAACCGAAGAGGTGTGAAGGTTTCAGGTTCAGGAAGACCATACTCATTGGGAAGACTGACATGGGTCAAGGTGAGGTGAGAGAGGTGATGGAAGAGCTAGCTGCTGAGTATAGAGGGAATGCATACAACTTGATCACCAAGAACTGCAACCATTTCTGCAATGATGCTTGTCTTAGGCTCACTGGGAATCCCATCCCCCGTTGGGTCAATCGCCTTGCAAGAATTGGTTTTTTGTGCAATTGTGTTCTTCCTGTGACTTTGAACTCAACCAAAGTCAGGCATCATAGGATAGAAGACAAGCAATGTGAAGGAGAGAAACAAGCATTGACCAATGAGTCCAACAAAGTCACTGCTTCAAATTCAACATCCTCTTCTACACCTTCCCCTGCTTCCACCTCGCGTGTGCGTAGGGGAAGGAGTAGAAAGAGACGCACTCTTCCTCCATCTTCACCCTTGATTATTGGCTCTTTGTCATCTTGA 678 0.4897 MLCRKSSRNGVASGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGVEYAFGAHEYSSTGIFEGEPKRCEGFRFRKTILIGKTDMGQGEVREVMEELAAEYRGNAYNLITKNCNHFCNDACLRLTGNPIPRWVNRLARIGFLCNCVLPVTLNSTKVRHHRIEDKQCEGEKQALTNESNKVTASNSTSSSTPSPASTSRVRRGRSRKRRTLPPSSPLIIGSLSS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2444 225 Pfam PPPDE putative peptidase domain 17 150 IPR008580 GO:0008233
Dod06g2444 225 PANTHER DESUMOYLATING ISOPEPTIDASE 5 224 IPR008580 GO:0008233
Dod06g2444 225 PANTHER F23A5.4 PROTEIN 5 224 - -
Dod06g2444 225 Gene3D PPPDE domains 12 170 IPR042266 -
Dod06g2444 225 ProSiteProfiles PPPDE domain profile. 16 153 IPR008580 GO:0008233
Dod06g2444 225 SMART DUF862_2a 16 154 IPR008580 GO:0008233
Dod06g2444 225 MobiDBLite consensus disorder prediction 173 200 - -
Dod06g2444 225 MobiDBLite consensus disorder prediction 170 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2444 Dod-Chr6 53145979 53149067 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2444 K22763 - gmx:100817929 350.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2444 06 53145979 53149067 Dod10g2157 10 43442220 43444398 ECH
Dod06g2444 06 53145979 53149067 Dod06g2444 06 53145979 53149067 ECH