Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2083 ATGGCGGCGGTGCTGCGGCGGTCGTCATTGCTCCGCTGGCGTGTGGTTCCGACAACACTGTCACGGAGCTCAGCCTCAGTTTCAGATACGACGTCGTCAGACACAACCCGAATACCGGTAGTGTTCCCCCGAAAATGTTTCAGCTCAGGCTCAGCTGCAGCAGCAAAAGCAGGAAGGTTTGGGAACAAAAAGTCGAACCTGCCCTCCATTGTGGAAGCCGGAGAGCCTGTTCTGCACTCGCGTGCCCAAGAAGTTAAGCCCAACGAGATAAATTCGGAGAGAGTGCAGAAGATCATCGATGACATGATCCACGCCATGAGGAACGCCCCTGGGGTTGGCCTTGCTGCTCCTCAGATTGGAATCCCCTTCAGGATAATTGTTTTGGAAGATAAAGAAGAGTATATTAGGCTAGACACAAAGGAAGAGACTGAAGCACAAGATAGAAGACCTTTTGATCTCTTGGTGATCTTGAATCCTAAGCTAAAGAAGAAGAGCAACAGGACTGCCCTGTTTTTTGAAGGCTGCTTGAGTGTCAATGGATTTCTAGGTGTGGTAGAGCGATACCTTGATGTTGAGGTTTCAGGTTTTGATCGTAATGGTGAACCCATCAAAATAAATGCTTCTGGTTGGCAGGCCCGGATTTTACAACATGAATGTGACCACCTGGATGGAACACTGTATGTTGATAAGATGCTACCTAAAACTTTCAGAACTGGAAAAAACTTGGACTTGCCTCTTGCCCATGGGTGCCCCAAACTTGGACCCCGCTAA 771 0.4877 MAAVLRRSSLLRWRVVPTTLSRSSASVSDTTSSDTTRIPVVFPRKCFSSGSAAAAKAGRFGNKKSNLPSIVEAGEPVLHSRAQEVKPNEINSERVQKIIDDMIHAMRNAPGVGLAAPQIGIPFRIIVLEDKEEYIRLDTKEETEAQDRRPFDLLVILNPKLKKKSNRTALFFEGCLSVNGFLGVVERYLDVEVSGFDRNGEPIKINASGWQARILQHECDHLDGTLYVDKMLPKTFRTGKNLDLPLAHGCPKLGPR* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2083 256 TIGRFAM pept_deformyl: peptide deformylase 70 234 IPR023635 GO:0042586
Dod10g2083 256 Gene3D Peptide deformylase 66 254 IPR036821 -
Dod10g2083 256 Hamap Peptide deformylase [def]. 66 242 IPR023635 GO:0042586
Dod10g2083 256 PANTHER PEPTIDE DEFORMYLASE 47 256 IPR023635 GO:0042586
Dod10g2083 256 CDD Pep_deformylase 70 227 IPR023635 GO:0042586
Dod10g2083 256 PANTHER PEPTIDE DEFORMYLASE 47 256 - -
Dod10g2083 256 SUPERFAMILY Peptide deformylase 69 236 IPR036821 -
Dod10g2083 256 Pfam Polypeptide deformylase 69 233 IPR023635 GO:0042586
Dod10g2083 256 PRINTS Peptide deformylase signature 204 233 IPR023635 GO:0042586
Dod10g2083 256 PRINTS Peptide deformylase signature 173 184 IPR023635 GO:0042586
Dod10g2083 256 PRINTS Peptide deformylase signature 100 129 IPR023635 GO:0042586
Dod10g2083 256 PRINTS Peptide deformylase signature 185 203 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2083 Dod-Chr10 42747645 42749694 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2083 K01462 - pvy:116144913 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2083 10 42747645 42749694 Dod10g2083 10 42747645 42749694 ECH
Dod10g2083 10 42747645 42749694 Dod06g2513 06 54182022 54185339 PCT