Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2513 ATGGATGCCTTACATTTGCAGAGTTTGCTTCTTCCTACAAGTGTCCTTGTTCCAACAACATTATCCAGAGTTGCAAGGTTACCATCACTGGAACTCAAGAACAACTTCATCACCCGCAAAGCTTTGAGATTTACCTCATCACCACCGCCACCATCACCATCATCAAGTGCCACTGTGAGAGCAGGGTGGTTCCTTGGCCTTGCAGATAACAAGAAGATGGGCTTGCCTGAGACAGTGAAAGCTGGTGACCCAGTTCTTCATGAGCCTGCTGAGGAGGTTGACCCCAATGAGGTGAAGAGTGAGAGGGTGCAGAAGATCATTGATGACATGATCAGTGTCATGAGGAAGGCTCCTGGTGTTGGACTAGCAGCACCCCAGATTGGAATTCCATTGAGGATAATTGTTCTGGAAGATACCAAGGAGTATATTGGCTATGCCCCAAAGGAAGAGATCAAAGCCCAAGATAGACGACCTTTTGATCTTTTGGTGATCCTGAATCCCAAGCTAGTGAAGGAGAGCAACAGGACAGCCCTATTTTTTGAAGGGTGCTTAAGTATTGACGGATTTAGAGCAGTGGTAGAGCGACACCTTGAAGTTGAAGTCACAGGTTTGGATCGATATGGTGAACCAATCAAAATAACAGCTACTGGTTGGCAGGCCCGGATTTTACAACATGAATGTGATCACTTAGAAGGAACCCTTTATGTTGATAAGATGGTGCCTAGAACTTTCAGAACTGTTGAAAACCGGGACCTGCCTCTTGCCAAGGGGTGCCCCAAACTTGGCCCTTGCTAA 795 0.4667 MDALHLQSLLLPTSVLVPTTLSRVARLPSLELKNNFITRKALRFTSSPPPPSPSSSATVRAGWFLGLADNKKMGLPETVKAGDPVLHEPAEEVDPNEVKSERVQKIIDDMISVMRKAPGVGLAAPQIGIPLRIIVLEDTKEYIGYAPKEEIKAQDRRPFDLLVILNPKLVKESNRTALFFEGCLSIDGFRAVVERHLEVEVTGLDRYGEPIKITATGWQARILQHECDHLEGTLYVDKMVPRTFRTVENRDLPLAKGCPKLGPC* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2513 264 Gene3D Peptide deformylase 75 263 IPR036821 -
Dod06g2513 264 PANTHER PEPTIDE DEFORMYLASE 10 263 IPR023635 GO:0042586
Dod06g2513 264 PRINTS Peptide deformylase signature 108 137 IPR023635 GO:0042586
Dod06g2513 264 PRINTS Peptide deformylase signature 181 192 IPR023635 GO:0042586
Dod06g2513 264 PRINTS Peptide deformylase signature 212 241 IPR023635 GO:0042586
Dod06g2513 264 PRINTS Peptide deformylase signature 193 211 IPR023635 GO:0042586
Dod06g2513 264 TIGRFAM pept_deformyl: peptide deformylase 78 242 IPR023635 GO:0042586
Dod06g2513 264 SUPERFAMILY Peptide deformylase 72 248 IPR036821 -
Dod06g2513 264 PANTHER PEPTIDE DEFORMYLASE 10 263 - -
Dod06g2513 264 CDD Pep_deformylase 79 235 IPR023635 GO:0042586
Dod06g2513 264 Hamap Peptide deformylase [def]. 74 254 IPR023635 GO:0042586
Dod06g2513 264 Pfam Polypeptide deformylase 79 242 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2513 Dod-Chr6 54182022 54185339 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2513 K01462 - gmx:100784292 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2513 06 54182022 54185339 Dod06g2513 06 54182022 54185339 ECH
Dod10g2083 10 42747645 42749694 Dod06g2513 06 54182022 54185339 PCT