Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2076 ATGCAGAGACTAACTATGAGTAGGCCAGGAGACTGGAACTGCAGATCATGCCAGCACCTGAACTTTCAGAGGCGTGATTCTTGCCAACGATGTGGAGATTCCAAATATGGAGATAGGGAAGATTTTGGGGGTTTTGGGGGAAGAGGAGGATCTAATTCATTTGGGATCAGTACTTCAGGGTCAGATGTTCGCCCAGGTGATTGGTATTGTGGTGTAGTTAACTGTGGCACACATAACTTTGCTAGCCGTTCAGGCTGCTTCAAGTGTGGTGCTTTCAAGGATGACTTTGCTGGGGGCTACAACACTACTGACACCTCACGCTCAAGAGCTTTTAGTGGCGCTGCCAAACCTGGATGGAAATCTGGTGATTGGATATGTCACAGATCAGGATGCAATGAGCACAACTTTGCTAGCAGAATGGAATGTTTCAAATGCTGTGCCCCGAGGGACACATACTAG 459 0.4771 MQRLTMSRPGDWNCRSCQHLNFQRRDSCQRCGDSKYGDREDFGGFGGRGGSNSFGISTSGSDVRPGDWYCGVVNCGTHNFASRSGCFKCGAFKDDFAGGYNTTDTSRSRAFSGAAKPGWKSGDWICHRSGCNEHNFASRMECFKCCAPRDTY* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2076 152 PANTHER ZINC FINGER PROTEIN 4 151 - -
Dod10g2076 152 ProSitePatterns Zinc finger RanBP2-type signature. 68 89 IPR001876 -
Dod10g2076 152 ProSitePatterns Zinc finger RanBP2-type signature. 124 145 IPR001876 -
Dod10g2076 152 SUPERFAMILY Ran binding protein zinc finger-like 116 150 IPR036443 -
Dod10g2076 152 ProSiteProfiles Zinc finger RanBP2 type profile. 8 37 IPR001876 -
Dod10g2076 152 ProSitePatterns Zinc finger RanBP2-type signature. 12 31 IPR001876 -
Dod10g2076 152 SMART zf_4 66 92 IPR001876 -
Dod10g2076 152 SMART zf_4 122 148 IPR001876 -
Dod10g2076 152 SMART zf_4 10 34 IPR001876 -
Dod10g2076 152 Pfam Zn-finger in Ran binding protein and others 120 149 IPR001876 -
Dod10g2076 152 Pfam Zn-finger in Ran binding protein and others 8 33 IPR001876 -
Dod10g2076 152 Pfam Zn-finger in Ran binding protein and others 64 91 IPR001876 -
Dod10g2076 152 ProSiteProfiles Zinc finger RanBP2 type profile. 120 151 IPR001876 -
Dod10g2076 152 PANTHER OS02G0203700 PROTEIN 4 151 - -
Dod10g2076 152 SUPERFAMILY Ran binding protein zinc finger-like 6 38 IPR036443 -
Dod10g2076 152 Gene3D - 56 95 - -
Dod10g2076 152 Gene3D - 5 37 - -
Dod10g2076 152 Gene3D - 114 151 - -
Dod10g2076 152 ProSiteProfiles Zinc finger RanBP2 type profile. 64 95 IPR001876 -
Dod10g2076 152 SUPERFAMILY Ran binding protein zinc finger-like 57 95 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2076 Dod-Chr10 42698785 42700166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2076 - - gmx:100499847 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2076 10 42698785 42700166 Dod06g2521 06 54252404 54254311 PCT