LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod10g2068	ATGTGGCGGAGGATCATCTCTTCTCAGTTCAAATCCCTAACTGCACTCTCACCTTCTCATCATCTCCGATCCGCTTCCGCCGCACTCCCATTCTCCGCCGCTCCTCCCTCCGCCGTTCTCCTCACCCGCCACGTCGCCACTCAATCGGGTGGTTCGATCAAAAAGAGGGTTGAGGATGTAATGCCAATTGCTACCGGCCACGAGCGCGAGGAGATTCAGGCTGATCTTGAGGGAAGGGATATTCTTGAAATCGATCATCCCAAAGGTCCTTTCGGCACAAAGGAAGCACCTGCTGTTGTAAAGTCTGTCTTTGATAGAAGGATTGTTGGATGCCCAGGAGGTGAAGGCGAGGATGAGCATGATGTTGTTTGGTTTTGGCTGGAGAAGGGCAAGTCTTACGAATGCCCAGTGTGCTCACAGTATTTTGTGCTTGAAGTGGTGGGATCTGGTGGTGATCCTTATGGGCATGGCGATCACGATCACCATTGA	489	0.5215	MWRRIISSQFKSLTALSPSHHLRSASAALPFSAAPPSAVLLTRHVATQSGGSIKKRVEDVMPIATGHEREEIQADLEGRDILEIDHPKGPFGTKEAPAVVKSVFDRRIVGCPGGEGEDEHDVVWFWLEKGKSYECPVCSQYFVLEVVGSGGDPYGHGDHDHH*	163

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod10g2068	162	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B	1	162	-	-
	Dod10g2068	162	ProSiteProfiles	Cytochrome c oxidase subunit Vb, zinc binding domain profile.	52	151	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Dod10g2068	162	CDD	Cyt_c_Oxidase_Vb	54	149	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Dod10g2068	162	Gene3D	Cytochrome c oxidase, subunit Vb	53	147	IPR036972	GO:0005740\|GO:0005751\|GO:0006123
	Dod10g2068	162	Pfam	Cytochrome c oxidase subunit Vb	63	152	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Dod10g2068	162	PANTHER	CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL	1	162	IPR002124	GO:0005740\|GO:0005751\|GO:0006123
	Dod10g2068	162	SUPERFAMILY	Rubredoxin-like	53	149	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod10g2068	Dod-Chr10	42652384	42658604	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod10g2068	K02265		-	gmx:100801050	211.075

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod06g2526	06	54300732	54306761	Dod10g2068	10	42652384	42658604	ECH
	Dod10g2068	10	42652384	42658604	Dod10g2068	10	42652384	42658604	ECH
	Dod10g2068	10	42652384	42658604	Dod06g2526	06	54300732	54306761	PCT