Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2526 ATGTGGCGGAGGCTCCTCTCTTCTAATCTCAAAACCCTAATTTCAACTTCAGCCTCCTCGGCTTCAGCTTCAGCTCCCAGATCTGCTTCCGCCGCCGCCGCTTCTCGCTCCTCCACCTTCCTTTCCCGCCACTTCTCGTCCCAATCCGAGGGTGGTAATACTACTACTACCACTACTACTTCCGTGAAAAAGAAGGTTGAGGATGTAATGCCAATAGCTACCGGGCACGAGCGTGAGGAGATTCAGGCTGAGCTTGAGGGAAGGGATATTCTTGAAATAGACCATCCTGAAGGTCCTTTCGGCACAAAGGAAGCACCAGCTGTTGTTAAATCTTACTATGATAAAAGGATAGTTGGATGCCCGGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTCATGAATGTCCAGTATGCTCACAGTATTTTGTGCTCGAAGTGGTGGGACCTGGTGGACCCCCTGATGGGCACGGCGACGATGATCACCACTGA 516 0.5155 MWRRLLSSNLKTLISTSASSASASAPRSASAAAASRSSTFLSRHFSSQSEGGNTTTTTTTSVKKKVEDVMPIATGHEREEIQAELEGRDILEIDHPEGPFGTKEAPAVVKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCSQYFVLEVVGPGGPPDGHGDDDHH* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2526 171 PANTHER - 1 171 - -
Dod06g2526 171 Pfam Cytochrome c oxidase subunit Vb 70 159 IPR002124 GO:0005740|GO:0005751|GO:0006123
Dod06g2526 171 MobiDBLite consensus disorder prediction 43 64 - -
Dod06g2526 171 MobiDBLite consensus disorder prediction 43 80 - -
Dod06g2526 171 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 61 160 IPR002124 GO:0005740|GO:0005751|GO:0006123
Dod06g2526 171 Gene3D Cytochrome c oxidase, subunit Vb 62 156 IPR036972 GO:0005740|GO:0005751|GO:0006123
Dod06g2526 171 SUPERFAMILY Rubredoxin-like 62 159 - -
Dod06g2526 171 CDD Cyt_c_Oxidase_Vb 61 156 IPR002124 GO:0005740|GO:0005751|GO:0006123
Dod06g2526 171 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 171 IPR002124 GO:0005740|GO:0005751|GO:0006123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2526 Dod-Chr6 54300732 54306761 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2526 K02265 - gmx:100780886 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2526 06 54300732 54306761 Dod10g2068 10 42652384 42658604 ECH
Dod06g2526 06 54300732 54306761 Dod06g2526 06 54300732 54306761 ECH
Dod10g2068 10 42652384 42658604 Dod06g2526 06 54300732 54306761 PCT