Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2059 ATGAACAAGCATTCTTGCCAAGAAGAATCCATCACTTTCCCAGCAGAAAAATCTCCAACCCATTTCACCTCCTCAGAATCTTGCTGGTTCGACGATGCATGCATCCTTGACATAGACTACTTCGTGAAGACCCTCTCAGGAATCAAAGAGAAAGGGGTGCGTGCGGATTTGATAGGTTCCATCATCACTCACTACGCTTCCAAATGGCTTCCTGACCTCTCTGCAGAAAAGGGTCTCACCCCATTGCAAGGATCATCACCAGAAAGCGCCACAACTTCGTGGATGAAGAAGAGGTTCTTCGTGGAAACATTGGTTGGTGTTCTTCCACCAGAGAAGGATTCAATCCCATGCAACTTCCTCCTTCGACTTCTGAGAACAGCAAACATGGTTGGCGTTGAGGCCACTTACAAGGGTGAGCTTGAGAAGCGCGTTTCGTGGCAGCTTGACCAGGCTTCACTGAAGGAGCTTATGATACCTTCTTTCAGCCACACTTGTGGGACACTTCTTGATGTTGAGCTTGTGATTAGGTTGGTTAAGAGGTTCGTGAGCTTGGACCATGAGGGTGTTAAGAGTGGCGCTGCTTTGGTTAAGGTGGCTAAGTTGGTTGATTGCTACCTTGCTGAGGCTGCTGTGGATGCCAATCTGAGCTTGTCTGAGTTTGTTGCACTTGCTGGAGCTCTTCCAAGCCATGCAAGAGCTACTGATGATGGCTTGTACAGAGCCATTGATACTTATTTAAAGGCACATCGGGGTGTGTCAAAGCAAGAAAGGAAGGGTCTATGCAGGCTTATTGATAGCAGGAAGCTCACACCAGAGGCTTCACTGCATGCAGCTCAAAATGAAAGGTTGCCCGTGAGAGCTGTCATTCAGGTTCTCTTCTCAGAACAAACCAAACTCAACCGCCACGTGGACTGGAGTGGCTCCTTCAGTGGGTTGAGGAGCCCCAAATCCAATGGCATTGGAGGCTTTGACCTACCGACACGGTGCCTTTCAAAGCGTGAAATGAATGCTCAGCAAATGGAGATAAGGAAGCTCAAGGAAGATGTTCATAGGCTGCAAAGCCAATGCAATGCCATGCAGGTGCAGATGGAGAGGATGGTTGAGAAGAAGAAGGGGTTCTTCAAGTGGAAGAAATTTGGTGTTCATGGCTTTGGTAAAAGCATGGGGGAGGTAGTTGAGAAAGTAGTTATGGAACGAGAGGGTGAAGGGGAAGTTGGGTTTGGAAGGGAAACGCCAATGGACATGAAAAACAGTTTGGTCAATGTTAGAACTCCTCACAAGTGGAGGAAATCTACGTCCTGA 1302 0.48 MNKHSCQEESITFPAEKSPTHFTSSESCWFDDACILDIDYFVKTLSGIKEKGVRADLIGSIITHYASKWLPDLSAEKGLTPLQGSSPESATTSWMKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVEATYKGELEKRVSWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFVSLDHEGVKSGAALVKVAKLVDCYLAEAAVDANLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHRGVSKQERKGLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHVDWSGSFSGLRSPKSNGIGGFDLPTRCLSKREMNAQQMEIRKLKEDVHRLQSQCNAMQVQMERMVEKKKGFFKWKKFGVHGFGKSMGEVVEKVVMEREGEGEVGFGRETPMDMKNSLVNVRTPHKWRKSTS* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2059 433 Coils Coil 335 369 - -
Dod10g2059 433 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 7 433 - -
Dod10g2059 433 ProSiteProfiles NPH3 domain profile. 27 298 IPR027356 -
Dod10g2059 433 Pfam NPH3 family 28 274 IPR027356 -
Dod10g2059 433 PANTHER OS12G0117600 PROTEIN 7 433 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2059 Dod-Chr10 42563728 42566837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2059 23 299 EF-hand Containing Proteins AT3G44820 35.831 5.17e-51 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2059 - - cam:101500573 626.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2059 10 42563728 42566837 Dod10g2059 10 42563728 42566837 ECH
Dod10g2059 10 42563728 42566837 Dod06g2532 06 54360769 54364042 PCT