Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2532 ATGTCCATGAAAGCTACAAAAGCAAACAATTCCCAATCTACTTTACTTGAGCTTCTCACAGAAATGAAGAAGCAGGCCTACACAGAATCCATCAAGTTGCCAGCAAGATCTCCATCATCCCAATTCTCCTCTGAATGCTGGTTTGATGATGCTTGCATCCTAGACATGGATTACTTTGTCAAGACCGTTGCAGGCATCAAGGCCAGAGGAGTTCGCGCAGACTTGATTGGTTCCATCATCACACACTATGCCGCTAAATGGCTCCCTGACCTCTCTGCTGGTGACTTGGCCGAAAAGGGTCTTACACAATTCGAAGAATCGCCGGAGAGTGTCACGGCTTCATGGATGAAGAAGAGGTTCTTTGTTGAAACCTTGGTTGGTGTTCTGCCTCCTGAGAAGGACTCCATCCCTTGCAACTTCCTCCTTCGCCTTCTCAGAACAGCCAACATGGTTGGTGTTGAGGCTAATTACACACAAGAGCTTGAGAAGCGAATTTCGTGGCAGCTAGACCAAGCTTCATTGAAAGAGCTTGTCATACCCTCTTTCAGCCACACTTGTGGGACTCTTTTTGATGTTGAGCTGGTCATTAGGCTGGTTAAGAGGTTTGTGAGTTTGGATAGTGAGGGAGCAAAGAGTGGGGCTGCTTTGGTTAAGGTGGCCAAATTGGTTGATTGCTACCTTGCTGAGGCTGCTGTGGATGCCAATTTGAGCTTGTCTGAATTTGTCACTCTTGCAGGAGCTCTTCCAAGCCATGCAAGAGCAACAGATGATGGATTGTACAGAGCCATTGATATTTATCTAAAAGTACATCCAGGGGTGTCAAAGGAAGAAAGAAAGGGTCTTTGCAGGCTTATTGATAGCAGGAAACTCACACCAGAGGCATCACTTCATGCAGCTCAGAATGAAAGGTTCCCAGTTAGAGCTGTTATTCAAGTGCTCCTCTCTGAGCAAACCAAACTGAACCGGCAACTAGATTGGAGTGGCTCCTTGATAAGTGGCAGCAGGAGTCCGTACGCCATGCTGGACACGTGTCATTCGAAGCGAGAAGTGAATTCTCAACAGATGGAGATAAGGAAGCTGAAGGAAGAGGTGTACAGGCTGCAAAGCCAGTGCAATGCCATGCAGGTGCAGCTAGAGAGGGTGGTGTTAGAGAAGAAGGGTAGAGGGTTGTTCAGGTGGAAGAGGTTTGGGATCATGCATGGTGCATTCAGCAGCAAAGGTGTGGTTGGGTTGGAGAAAATAGGTGAAGAGGTTGAAGGGGAAGTTGTTGGTTTTAATGGAAGGCAAACTCCAATGGACATGAAAACTAGGTTGGTCAAAGGTAGGAGTACTCCTCGAAGGTGGAGGAAATCCATGTCGTGA 1362 0.4728 MSMKATKANNSQSTLLELLTEMKKQAYTESIKLPARSPSSQFSSECWFDDACILDMDYFVKTVAGIKARGVRADLIGSIITHYAAKWLPDLSAGDLAEKGLTQFEESPESVTASWMKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVEANYTQELEKRISWQLDQASLKELVIPSFSHTCGTLFDVELVIRLVKRFVSLDSEGAKSGAALVKVAKLVDCYLAEAAVDANLSLSEFVTLAGALPSHARATDDGLYRAIDIYLKVHPGVSKEERKGLCRLIDSRKLTPEASLHAAQNERFPVRAVIQVLLSEQTKLNRQLDWSGSLISGSRSPYAMLDTCHSKREVNSQQMEIRKLKEEVYRLQSQCNAMQVQLERVVLEKKGRGLFRWKRFGIMHGAFSSKGVVGLEKIGEEVEGEVVGFNGRQTPMDMKTRLVKGRSTPRRWRKSMS* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2532 453 Coils Coil 350 377 - -
Dod06g2532 453 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 4 453 - -
Dod06g2532 453 Pfam NPH3 family 46 295 IPR027356 -
Dod06g2532 453 PANTHER OS12G0117600 PROTEIN 4 453 IPR043454 -
Dod06g2532 453 ProSiteProfiles NPH3 domain profile. 45 319 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2532 Dod-Chr6 54360769 54364042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2532 44 324 EF-hand Containing Proteins AT3G44820 36.364 4.27e-54 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2532 - - gmx:100793820 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2532 06 54360769 54364042 Dod06g2532 06 54360769 54364042 ECH
Dod10g2059 10 42563728 42566837 Dod06g2532 06 54360769 54364042 PCT