Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2055 ATGCCTTCACTCTCAGAAGCCTACAGAGCCCACCCCGTTGACGTTCACCACCACCACAAGCACCCGGACTTCAAGTCCCTACAAGAACTCCCCGAATCATACGCTTGGACAGATCACACTGCTAATATTACCAGCAACAACAACAACCCTTCAAGGGGGTGCTGCGAGGGTACTATTGGTATCCCCGTTATTGATCTCAAGGACCCAAATGCTTCGAAGCTTATAGGGCATGCATGCATGACTTGGGGTGCCTTCCAACTGGTGAACCACGGGGTGCCCATAAACCTCCTCGAAGACATTCAGTGGGCCGGGCAGGCCCTGTTCTCACTCCCCTCTCACCAAAAGCTCAAAGCGGCTCGTTCCCCGGACGGCGTCTCGGGCTACGGGCTGGCCCGCATCTCATCCTTCTTCCCAAAGCTCATGTGGTCCGAGGGCTTCACAATCGTTGGATCCCCTCTCGAGCATTTCCGCCAACTCTGGCCCCAAGATTACGCCCAATACTGTGATATTGTCGTGCAGTATGATGAAACCATGAAAACGCTAGCGGGAAAGCTGATGTGGCTCATGTTGGACGCTCTCGGCATTTCAAAAGAGGACCTCAAATGGGCCGGATCAAAGGGCCCATTCTCCAAAGAGCCTTGTGCCGCCTTGCAGTTGAACTCCTACCCGAGTTGTCCAGATCCGGATCGGGCCATGGGTCTTGCCCCGCATACCGACTCCACCCTCCTCACAATTCTTCACCAGAACAACATAAGCGGGCTGCAGGTCCTCCGGGAGGGATCCGGGTGGGTGACGGTGCCGCCGCTCGCTGATGGGCTGGTGGTAAATGTTGGTGACCTCTTCCATATCATGTCAAACGGGTTGTACCCGAGTGTGCTCCACCGGGTTCTAGTGAACCGGACCCGGCAGCGGTTTTCAGTTGCGTACCTATATGGGCCCCCGCCCAATGTGGAGATCTGTCCGCATGCAAAGCTGGTAGGCCCAACAAGGCCTGCACTTTATCGGCCGGTGACTTGGAACGAGTACCTTGGCGCTAAAGCAAAGCACTTCAATAAGGCACTCTCATCCGTTCGACTTTTTGCACCTATTAATAACGGTTTATTCTCGCAAGAACAACGTGCAAGTGGGCTAGATAGCTTTTGA 1143 0.5459 MPSLSEAYRAHPVDVHHHHKHPDFKSLQELPESYAWTDHTANITSNNNNPSRGCCEGTIGIPVIDLKDPNASKLIGHACMTWGAFQLVNHGVPINLLEDIQWAGQALFSLPSHQKLKAARSPDGVSGYGLARISSFFPKLMWSEGFTIVGSPLEHFRQLWPQDYAQYCDIVVQYDETMKTLAGKLMWLMLDALGISKEDLKWAGSKGPFSKEPCAALQLNSYPSCPDPDRAMGLAPHTDSTLLTILHQNNISGLQVLREGSGWVTVPPLADGLVVNVGDLFHIMSNGLYPSVLHRVLVNRTRQRFSVAYLYGPPPNVEICPHAKLVGPTRPALYRPVTWNEYLGAKAKHFNKALSSVRLFAPINNGLFSQEQRASGLDSF* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2055 380 Pfam non-haem dioxygenase in morphine synthesis N-terminal 61 161 IPR026992 -
Dod10g2055 380 SUPERFAMILY Clavaminate synthase-like 17 350 - -
Dod10g2055 380 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 212 313 IPR005123 -
Dod10g2055 380 Pfam 2OG-Fe(II) oxygenase superfamily 217 313 IPR044861 -
Dod10g2055 380 Gene3D - 22 353 IPR027443 -
Dod10g2055 380 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 358 - -
Dod10g2055 380 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2055 Dod-Chr10 42466763 42468803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g2055 50 354 Glycosyltransferase AT5G59530 31.173 1.98e-38 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2055 K04124 - gmx:100798572 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2055 10 42466763 42468803 Dod10g2055 10 42466763 42468803 ECH
Dod10g2055 10 42466763 42468803 Dod06g2539 06 54450483 54453759 PCT