Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2539 ATGCCTTCACTCTCCGAAGCCTTTAGAGCACACCCTGTGCACCTTCACCACAAGCACCCTGACTTCAATTCTCTACAAGAACTCCCTGATTCTTATGCTTGGACACAACTAGATGATGATCACATCAATTATCCTTCGGAATCATACATCGGTGGTGGTGATAAAGAGAGTGTCCCAATTATTGATCTCAATGACCCAAATGCTCCAAAGTTCATAGGCCATGCATGCAAAACATGGGGTGTGTTCCAAGTTTTGAACCATGGCATCCCCATGAACCTCTTCGGCGAAATTCAGCGCGCCGGCCAGGCCCTCTTCTCGCTCCCTGCTCACCAAAAGCTCAAGGCGGCCCGAACCCCAGATGGGGTCTCGGGCTATGGCCGTGCTCGGATCTCCTCCTTCTTCCCAAAGCTCATGTGGTCTGAGTGCTTCACAATTGTTGAATCCCCTCTTGAACATTTCCTCCAACTGTGGCCCCACGACTACAGCAAATACTGTGATGTTGTGGAGCAATACCAAGAAGCCATGGAGAAACTAGCACAAAAGCTAATGTGGCTAGTGTTGACTTCCCTTGGCATTTCCAAGGAAGATCTCAAATGGGCCGGCCCCAGAGGTGAATTCAAAGGGGCTTGTTCAGCCTTACATTTAAACTTCTACCCGAGTTGTCCGGATCCGGCTCGGGCCATGGGTCTCGCCCCGCACACTGACTCCACTCTCCTCACAATCCTATCCCAAGACAACATAAGTGGGTTGCAAGTTCTTAGAGACGGTGTTGGGTGGGTGGCAGTTCCCCCTCTTCCCGGTGGCCTTGTGATCAACATGGGTGACCTCTTCCACATCTTGTCGAACGGGTTGTACCCGAGTGTGCTCCATCGGGTGCTGGTGAACCGGACCCGGGAACGGTTCTCAGTTGCATATCTATATGGGCCTCCACCAAATGTCCAAATATGCCCACATGCAAAGTTGGTAGGCCCAAATAGACCGGCCCTTTACCGACCAGTGACTTGGAGCGAGTACCTTGGCACCAAAGCAAAGTATTTCAACAAGGCACTCTCATCGGTTCAGCTTTGTGCACCTATTAATGGTTTGTTTGATGTAAATGAGGCTCATAATAACAGTGTACAAGTGGGTAGATAG 1134 0.5044 MPSLSEAFRAHPVHLHHKHPDFNSLQELPDSYAWTQLDDDHINYPSESYIGGGDKESVPIIDLNDPNAPKFIGHACKTWGVFQVLNHGIPMNLFGEIQRAGQALFSLPAHQKLKAARTPDGVSGYGRARISSFFPKLMWSECFTIVESPLEHFLQLWPHDYSKYCDVVEQYQEAMEKLAQKLMWLVLTSLGISKEDLKWAGPRGEFKGACSALHLNFYPSCPDPARAMGLAPHTDSTLLTILSQDNISGLQVLRDGVGWVAVPPLPGGLVINMGDLFHILSNGLYPSVLHRVLVNRTRERFSVAYLYGPPPNVQICPHAKLVGPNRPALYRPVTWSEYLGTKAKYFNKALSSVQLCAPINGLFDVNEAHNNSVQVGR* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2539 377 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 208 309 IPR005123 -
Dod06g2539 377 SUPERFAMILY Clavaminate synthase-like 15 345 - -
Dod06g2539 377 Gene3D - 21 348 IPR027443 -
Dod06g2539 377 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 368 - -
Dod06g2539 377 Pfam 2OG-Fe(II) oxygenase superfamily 212 309 IPR044861 -
Dod06g2539 377 Pfam non-haem dioxygenase in morphine synthesis N-terminal 58 158 IPR026992 -
Dod06g2539 377 PANTHER GIBBERELLIN 3-BETA-DIOXYGENASE 1-LIKE 3 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2539 Dod-Chr6 54450483 54453759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod06g2539 72 350 Glycosyltransferase AT5G59530 31.959 4.10e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2539 K04124 - gmx:100795921 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2539 06 54450483 54453759 Dod06g2539 06 54450483 54453759 ECH
Dod10g2055 10 42466763 42468803 Dod06g2539 06 54450483 54453759 PCT