Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g2028 ATGGGTAGCGGGGGTGAAGAAGATGTTGAGTATGAGAGTGATCCCGAAGAGTCGAAGAGATTGCTCGGAATGCGGAGGAGGCGTGGGGCAAGTAGTGACGATGAGGAACCTGAAGACGAAGCTGAAATCAATGGTTCAGATCGCCGTGTGATTCGTTCCGATGAATCCGACGGCGAGGGTGGAGTGGCCGATTACGATGACGAAGAAGAGGAAGAAGAAGAAGAATTGGAGGATGATGAAGAAGAAGAAGAAGGATTGGAGGAAGAGGAAGAAGAGGAGGTGTACGAAGAAGAAGAAGATGACAGGGGTGTGGAGCAACGAGTTGTGAATGGCTCAGTGGTTGGAGTGAAGGGTTCTGATGATGCTGATTTGAAACGCCATTTGGAAGAAGAAGGAGAAGAAGAAGAAGAAGGTTCAGGGAACAAGGATGAAGAAGAGAAGAAGGAGAATGAGCCATTTGCGGTTCCCACAGCTGGAGCGTTTTACATGCACGATGATCGTTTCAGGGATAATGTTGGTGCTCGCCACAGGCGGATGCGTGGTGGAAGGAGACTGTGGGAGTCCAGAGATGATAGAAAATGGGGGCACGATAAGTTTGAGGAGATTACTTTTCAGGAAAGACACTACAAAGAGGGTAGGAGGCCTTCTAGGGGTAACTATAGAGGCCGTGGTAAAACTCGAGGGGTTGGTCGTGGAGGATATGTTCGAGGAAACAGGAAAGGATATGATAACAGTGGTAATCAAGGTCAGGCACCTAAGGCTATTGTGCGAGGGAGAGGGCCCCGAAGATATGAGCCTACCTTTAAAAGAAGGGATCAAACATCCCAGGTGCAAAATAAACAATCTTCTTCAAAGCTTCCTGAGAAAACTTCACACGTTAGTTCAGGAAGAACTTCTGCACCTGCCTCAAATTCTGAATCTGATCCTGTGCCTGCTAAGAAACAAGTGTTTGCTTCAAATTTGAATTCTGCATCTCCCCCTTTTTACCCTTCAGGTGCTGCCAACAAAGAGGTTAATCTGACAACAAAAAGGGATGTCCAAGCTGGCAGCACAAGCCGGAGTGTTCGCCCTGGTGTTGTGGAAGAAGGATTTTCAGTTCAACAAAATAACACCTTGCTTCGGGGAAAGAATGTTGTTGATACTATTGGCATGGATAAGCTGTATATTGATAAGTCCATCAGCCAATCTATTGGCAAGCCTTTGAATAATTTGCGTGTGGTACCACCTGGATCTTCTGGAGTTAATGCTTCTCAAGCTCCTCATCCAAGGGCTCCTGCGAGGGGTGGAGCAATCCCAGTACAGATGAATTATCAGCCTGCTAATCAAGTCAATAAATTTTCTCCAGTGCAACACCAGGCTATGCAGAGGAGTTCTGCACCAGGTCGAAATTCAACCAGTGTGAGAGCCCCTCCCCGACAGCTTGGTCATCGACCTGGCAGTGGGTCTCAAACTTCATCTCCTCCAAAAACATCTGGGGCAATCAATTCCTTGGGTTCTGGAGAAATTGATGCAGCTTCAGAGTCAGGTAAATTCAAAGGTGCATTAGTTGGGAAGGGAAGGGGAGGTACTCAGGGTAATGGAAGGGGTTCCTTTGTTTATGGTGGAGCTGTGGGGACTGCTGGAAACGTGAGTGGTAGTCCTGGAGATCAGAACTTCCCGGCCTTCTTGCCAGTTATGCAATTTGGAGGTCAGCATTCTGGTGGTATTGGAGTTCCTGCCGTAGGCATGGCATTCCCTGGATATGTTGCTCAGCCTCAACTTGGTTTGGGAAACTCTGAAATGACATGGCTACCAGTTTTGGCTGGTGCTGCCGGAGCCTTAGGGGCTACCTACTGTCCACCCTGCCTCACTGTTGATGGTGCATATCATGCTCGACAGTCAGGACAGACATCTGCAACAGCTACTTCTAGCAAGGAAAACACTGCTAATAAAGCTAATAATGAATGGAGGCCACCACAGAAACCTGAGCCTGTAAGTAATGAGTTTGGACAGCGGCAGAATAAGCCCCGCAGGCAAGTTGGATTGCAAAAGCACTAG 2037 0.4801 MGSGGEEDVEYESDPEESKRLLGMRRRRGASSDDEEPEDEAEINGSDRRVIRSDESDGEGGVADYDDEEEEEEEELEDDEEEEEGLEEEEEEEVYEEEEDDRGVEQRVVNGSVVGVKGSDDADLKRHLEEEGEEEEEGSGNKDEEEKKENEPFAVPTAGAFYMHDDRFRDNVGARHRRMRGGRRLWESRDDRKWGHDKFEEITFQERHYKEGRRPSRGNYRGRGKTRGVGRGGYVRGNRKGYDNSGNQGQAPKAIVRGRGPRRYEPTFKRRDQTSQVQNKQSSSKLPEKTSHVSSGRTSAPASNSESDPVPAKKQVFASNLNSASPPFYPSGAANKEVNLTTKRDVQAGSTSRSVRPGVVEEGFSVQQNNTLLRGKNVVDTIGMDKLYIDKSISQSIGKPLNNLRVVPPGSSGVNASQAPHPRAPARGGAIPVQMNYQPANQVNKFSPVQHQAMQRSSAPGRNSTSVRAPPRQLGHRPGSGSQTSSPPKTSGAINSLGSGEIDAASESGKFKGALVGKGRGGTQGNGRGSFVYGGAVGTAGNVSGSPGDQNFPAFLPVMQFGGQHSGGIGVPAVGMAFPGYVAQPQLGLGNSEMTWLPVLAGAAGALGATYCPPCLTVDGAYHARQSGQTSATATSSKENTANKANNEWRPPQKPEPVSNEFGQRQNKPRRQVGLQKH* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g2028 678 Pfam CASC3/Barentsz eIF4AIII binding 127 225 IPR018545 GO:0003729|GO:0006397|GO:0035145
Dod10g2028 678 MobiDBLite consensus disorder prediction 477 497 - -
Dod10g2028 678 MobiDBLite consensus disorder prediction 449 501 - -
Dod10g2028 678 MobiDBLite consensus disorder prediction 408 430 - -
Dod10g2028 678 MobiDBLite consensus disorder prediction 629 678 - -
Dod10g2028 678 MobiDBLite consensus disorder prediction 42 59 - -
Dod10g2028 678 MobiDBLite consensus disorder prediction 449 470 - -
Dod10g2028 678 SMART Btz_2 112 226 IPR018545 GO:0003729|GO:0006397|GO:0035145
Dod10g2028 678 Coils Coil 62 96 - -
Dod10g2028 678 MobiDBLite consensus disorder prediction 14 34 - -
Dod10g2028 678 MobiDBLite consensus disorder prediction 629 648 - -
Dod10g2028 678 PANTHER PROTEIN MLN51 HOMOLOG 1 675 IPR044796 GO:0003729|GO:0006397|GO:0035145
Dod10g2028 678 MobiDBLite consensus disorder prediction 204 218 - -
Dod10g2028 678 MobiDBLite consensus disorder prediction 271 336 - -
Dod10g2028 678 MobiDBLite consensus disorder prediction 204 336 - -
Dod10g2028 678 MobiDBLite consensus disorder prediction 1 160 - -
Dod10g2028 678 MobiDBLite consensus disorder prediction 60 100 - -
Dod10g2028 678 PANTHER PROTEIN MLN51 HOMOLOG 1 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g2028 Dod-Chr10 42047884 42051923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g2028 - - gmx:100816837 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2028 10 42047884 42051923 Dod10g2028 10 42047884 42051923 ECH
Dod10g2028 10 42047884 42051923 Dod06g2550 06 54654825 54659609 PCT