Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2550 ATGGCTTCTAACGCGGTTGAGGAAGATGTTGAGTACGAGAGTGATCCTGAAGATGCAAAGAGATCGCTTACAATGCGGAGGCGTGAGATGGCCAGTGATGATGAAGCAGATGCCGCAGATAATAAGAGGGAAGATGATGATCCTCGTGTTCATTCTGATGATTCAGATGGTGAAGGTGGTGCAGCTGATTATGATGATGAAGATGATGAAGAAGAATTGGTAGAAGAAGAGGAGGAGGAGGAGTTGGATGAGGTTGAAGAAGAGGTGTATGAGGAGAGGGGTGTGGAGGAAGAAGAAAGAGGCGCAAGTGGTGGTGCTGAGGGTTCTGTGGTTGTGGTAAAGGAATCTGATGATGGTGGTGATGTTAGAACCACTTTGGAAGGTTCTGCTGAGGAGTTGCATTCAGGGGAGAAGAAGGAGAATGAGCCATTTGCGGTTCCCACAGCTGGAGCATTTTACATGCATGATGATCGTTTCAGGGACAATGCCGGTGGTAGGCACAGGCGGATACATGGTGGAAGGAGACTGTGGGAGTCCAAAGATGACAAGAAGTGGGGACATGATAAATTTGAGGAAATTACTTTGCAGGATAGGCACTACCAGGAGGGGAGGAGATCTTCTAAGGGTAATTATCGGGGTCATGCTAAAAGTCGAGGTACTGATCGTGGAGGATATGTTCGAGGAAACAGGAAAGGATATAATAGTAACAGTGGCAGCCAGAGATATAATAGTAACAGTAGCAATGGAAGATATAATAATAACAGCAGCAACCAAAGTCAGGTGCCTAAGGGTGTTGTGCGTGGGAGAGGACCCCGGAGATATGACCCTACCAATAAAAGCAATGGACTAGCACCCCAAGTGCAAAATAAACAATCTGCAAAGCCTCTTGAGAAGACTTCAAATGGTAATTTGGAACGAATGTCAGCATCCACTTCCAATGCAGAACCTGAGCATGTACCTGCTAAGAGACAAGTTTTTGCTTCAAATTTGAATTCTGCATCTCCTCCTTTTTACCCCTCGGGTTCTTCCAACAAAGAGACCAATCTGATGCAAAAAAGGGATGTACAATCGGGCAGCACTAGCAGGAACGAGGGTTTTCCAGTTCAACAGAACAATGCCTTGCTTCGCGGAAAGAGTGTTGTGGATCCCATCAAGATGGACAAGCTGCATATTGCTGAGTCTGTTGGTCCATCTGTTCGGAAGCCTTTGAACAATGTGCATATGGCACCTGGATCTTCTGGAGTCAGTTCTCAATCTTCTCAGCCCAGGGCTGCTGGGAGGGGTTTGGCAATCCCGGTACAGATGAATTATCAGGCTGGTCCCTCGTATAATCAAGTAAATAAAGTTCCTCCAATGCAACACCAGGCCAGTCAGAGAAGTTCTGCTCCAGGACAGACTTCAGCATCTGTGCAAGCTACTGCCCCAAAGTTGGGCCATCGACCTGATAGTGGGTCTCGATCAACATCTCCCCCCAAAACATCTGCATCTATTAATTCATTTGATTCTGGAATAATTGATGCAGCATCAGAATCAGGTAAATCTAAAGGTACATTGGTTGGGAAGGGAAGGGGAGTTTCCCAGGGTAGTGGAAGAGGCTCGTTTGTTTATGGTGGGGCTCAGGTCATGGGGGCTGCTGGAAATGTGGCTGTTAGTCATGGAGATTCAAACTTCCCAACGTTCTTGCCAGTCATGCAATTTGGGGGGCAGCATCCTGGTGGTATAGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGGTCAGCCGGGAAGCTCCGAAATGACGTGGCTACCAGTTTTGGCTGGCGCTGCGGGAGCATTAGGGGCTACATATTGTTCACCATACCTAGCTGTTGACGGTGCTTACAACCGACAATCAGGACCGACCTCTGCAACGGGTACTTCAAGCAAGGAAAATAATGCCAAAAAAGCTAACAATGAGTTGAAGCCACCACAGAGATCTGAGGTTTTGAGTGACGAGTTTGGACAGAGGCAGAATAAACCCCGAAGGCAAGTTGGATTTGAAAATTTTCATTTTGTAGTTTAA 2049 0.47 MASNAVEEDVEYESDPEDAKRSLTMRRREMASDDEADAADNKREDDDPRVHSDDSDGEGGAADYDDEDDEEELVEEEEEEELDEVEEEVYEERGVEEEERGASGGAEGSVVVVKESDDGGDVRTTLEGSAEELHSGEKKENEPFAVPTAGAFYMHDDRFRDNAGGRHRRIHGGRRLWESKDDKKWGHDKFEEITLQDRHYQEGRRSSKGNYRGHAKSRGTDRGGYVRGNRKGYNSNSGSQRYNSNSSNGRYNNNSSNQSQVPKGVVRGRGPRRYDPTNKSNGLAPQVQNKQSAKPLEKTSNGNLERMSASTSNAEPEHVPAKRQVFASNLNSASPPFYPSGSSNKETNLMQKRDVQSGSTSRNEGFPVQQNNALLRGKSVVDPIKMDKLHIAESVGPSVRKPLNNVHMAPGSSGVSSQSSQPRAAGRGLAIPVQMNYQAGPSYNQVNKVPPMQHQASQRSSAPGQTSASVQATAPKLGHRPDSGSRSTSPPKTSASINSFDSGIIDAASESGKSKGTLVGKGRGVSQGSGRGSFVYGGAQVMGAAGNVAVSHGDSNFPTFLPVMQFGGQHPGGIGVPAVGMAFPGYVGQPGSSEMTWLPVLAGAAGALGATYCSPYLAVDGAYNRQSGPTSATGTSSKENNAKKANNELKPPQRSEVLSDEFGQRQNKPRRQVGFENFHFVV* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2550 682 SMART Btz_2 111 217 IPR018545 GO:0003729|GO:0006397|GO:0035145
Dod06g2550 682 MobiDBLite consensus disorder prediction 114 141 - -
Dod06g2550 682 Coils Coil 68 95 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 59 94 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 441 499 - -
Dod06g2550 682 Coils Coil 681 682 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 626 670 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 230 263 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 15 58 - -
Dod06g2550 682 PANTHER PROTEIN MLN51 HOMOLOG 1 673 IPR044796 GO:0003729|GO:0006397|GO:0035145
Dod06g2550 682 MobiDBLite consensus disorder prediction 626 648 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 1 146 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 400 425 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 279 317 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 352 371 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 482 499 - -
Dod06g2550 682 Pfam CASC3/Barentsz eIF4AIII binding 120 216 IPR018545 GO:0003729|GO:0006397|GO:0035145
Dod06g2550 682 MobiDBLite consensus disorder prediction 441 473 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 409 424 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 174 225 - -
Dod06g2550 682 MobiDBLite consensus disorder prediction 159 319 - -
Dod06g2550 682 PANTHER PROTEIN MLN51 HOMOLOG 1 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2550 Dod-Chr6 54654825 54659609 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2550 - - mtr:MTR_4g011920 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g2028 10 42047884 42051923 Dod06g2550 06 54654825 54659609 PCT