Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1959 ATGATCTCCTCCAGCAGATGCTCCTTCGTGAGCAACTCAGCGCTAGCTGGGTCTCGCAGCTTCAATGGTGCACAAGGAAGGGGTTCTTCTCCTTCAGGCCCTTTCAGGGTGGTGTGTTTGGCGCCGAGCAGCAGGTCAGGTGACAGGAGCGGCAGCGTTGTGATGGAGACGCTTCCGAAAGAGCTGAGGAGCGAAAGGAACGATCCAAAGGTGGCGGATGTTGAAGAAGAAACAATCTCTGCCGGCGGCCCTCAGGACGTGTACGGCGAGGATAGGGCCACGGAGGATCAGTTTGTTACTCCTTGGAACGTCTCTGTTGCTAGTGGTTATACACTGTTGCGAGATCCCCACTTCAACAAGGGTTTGGCCTTCACTGAAAAAGAGAGGGATGCTCACTACTTGCGTGGTCTTCTTCCCCCTAGAGTTATTTCTCAAGAAACTCAGGTGAAGAAAATGATCCAGCATGTACGCCAGTATCAAGTTCCATTGCAGAAGTACATGGCAATGATGGATCTTCAGGAGAGAAATGAAAGGCTGTTTTACAAGCTTCTTATTGAGCATGTTGAAGAATTACTCCCAGTTGTCTATACTCCAACCGTTGGTGAAGCTTGCCAGAAATATGGGACCATCTTCATGCGTCCTCAGGGCCTTTACATTAGTTTGAAAGAAAAGGGGAGGATTCTTGAAGTACTAAGGAATTGGCCTGAGAAGAACATTCAAGTCATTGTTGTAACTGATGGAGAAAGGATCTTGGGTCTCGGAGATCTTGGTTGCCAGGGGATGGGAATACCGGTGGGAAAACTTTCTTTATATACAGCGCTCGGAGGAGTTCGTCCTTCTGCTTGTTTGCCTATCACCATTGATGTGGGTACAAACAATGAGAAGCTGTTGAATGATGAATTATATATAGGGCTCAAGCAAAGACGAGCAACTGGACAGGAATATGCTGAACTTATGCACGAATTTATGACTGCAGTCAAGCAAAATTATGGGGAGAAAGTCCTCATTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTGCTTGAAAAATATAGATCAACCCATCTTGTTTTTAATGATGATATTCAGGGTACAGCATCAGTAGTCCTTGCTGGACTAGTTGCAGCTCTGAAATTGGTTGGGGGGAATTTGGCCAACCATAGATTCTTATTCCTTGGTGCTGGAGAGGCTGGCACTGGTATTGCAGAACTCATTGCACTTGAAACATCAAAACAGACAAATGCCCCACTGGAGGAAGTGCGCAAGAATATTTGGTTGGTGGACTCAAAGGGATTGATTGTTAGTTCCCGTAAAGAATCACTTCAACATTTTAAGAAGCCATGGGCTCATGAGCATGAACCTGTTAAAGGACTCATAGATGCCATTAATAAAATTAAGCCAACAGTGTTGATTGGAACATCTGGACAGGGAAGAGCTTTTACTAAGGAGGTGATCGAGGCTATGGCTTCAATCAATGAGAAACCTATTATTCTTTCGCTTTCCAACCCTACTTCACAGTCAGAATGTACTGCTGAAGAGGCTTATAAGTGGAGCCAGGGACGTGCCATTTTTGCTAGTGGAAGCCCATTTCCCCCGGTTGAATATGAGGGAAAAGTCTTTGTGCCTGGCCAGGCCAACAATGCATACATATTTCCCGGGTTCGGTCTAGGTTTGATAATGTCCGGGACCATTCGGGTGCATGACGACCTGCTTCTGGCTGCCTCGGAGGCTTTGGCTGCACAAGTGACACAGGAGAACTTTGACAAAGGGCTCATATACCCTCCATTCGCCAATATCAGGAAGATTTCAGCACACATTGCAGCCAACGTTGCTGCTAAGGCTTATGAGCTTGGGTTGGCCACTCGCCTTCCTGAACCCAAAGATTTGGTGAAGTTTGCTGAGAGCTGTATGTATACCCCATCCTACAGAAGCTACCGGTGA 1947 0.4653 MISSSRCSFVSNSALAGSRSFNGAQGRGSSPSGPFRVVCLAPSSRSGDRSGSVVMETLPKELRSERNDPKVADVEEETISAGGPQDVYGEDRATEDQFVTPWNVSVASGYTLLRDPHFNKGLAFTEKERDAHYLRGLLPPRVISQETQVKKMIQHVRQYQVPLQKYMAMMDLQERNERLFYKLLIEHVEELLPVVYTPTVGEACQKYGTIFMRPQGLYISLKEKGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLKQRRATGQEYAELMHEFMTAVKQNYGEKVLIQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLANHRFLFLGAGEAGTGIAELIALETSKQTNAPLEEVRKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVKGLIDAINKIKPTVLIGTSGQGRAFTKEVIEAMASINEKPIILSLSNPTSQSECTAEEAYKWSQGRAIFASGSPFPPVEYEGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAAQVTQENFDKGLIYPPFANIRKISAHIAANVAAKAYELGLATRLPEPKDLVKFAESCMYTPSYRSYR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1959 648 Pfam Malic enzyme, NAD binding domain 364 616 IPR012302 GO:0051287
Dod10g1959 648 SMART malic_2 173 354 IPR012301 GO:0004471
Dod10g1959 648 PIRSF ME 65 648 IPR001891 GO:0004470|GO:0004471
Dod10g1959 648 Gene3D - 362 648 - -
Dod10g1959 648 MobiDBLite consensus disorder prediction 63 89 - -
Dod10g1959 648 PRINTS Malic enzyme signature 275 297 IPR001891 GO:0004470|GO:0004471
Dod10g1959 648 PRINTS Malic enzyme signature 494 510 IPR001891 GO:0004470|GO:0004471
Dod10g1959 648 PRINTS Malic enzyme signature 360 376 IPR001891 GO:0004470|GO:0004471
Dod10g1959 648 PRINTS Malic enzyme signature 239 268 IPR001891 GO:0004470|GO:0004471
Dod10g1959 648 PRINTS Malic enzyme signature 335 353 IPR001891 GO:0004470|GO:0004471
Dod10g1959 648 PRINTS Malic enzyme signature 179 203 IPR001891 GO:0004470|GO:0004471
Dod10g1959 648 PRINTS Malic enzyme signature 391 407 IPR001891 GO:0004470|GO:0004471
Dod10g1959 648 SMART Malic_M_2 364 617 IPR012302 GO:0051287
Dod10g1959 648 Gene3D - 107 361 IPR037062 GO:0004471
Dod10g1959 648 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 364 647 IPR036291 -
Dod10g1959 648 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 87 363 IPR046346 -
Dod10g1959 648 ProSitePatterns Malic enzymes signature. 360 376 IPR015884 GO:0004471
Dod10g1959 648 PANTHER MALIC ENZYME 24 648 - -
Dod10g1959 648 PANTHER MALIC ENZYME-RELATED 24 648 - -
Dod10g1959 648 Pfam Malic enzyme, N-terminal domain 173 354 IPR012301 GO:0004471
Dod10g1959 648 CDD NAD_bind_1_malic_enz 364 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1959 Dod-Chr10 41402634 41409875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1959 K00029 - gmx:100791514 1131.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2634 06 56139436 56148261 Dod10g1959 10 41402634 41409875 ECH
Dod02g3519 02 72370893 72376364 Dod10g1959 10 41402634 41409875 ECH
Dod10g1959 10 41402634 41409875 Dod10g1959 10 41402634 41409875 ECH
Dod10g1959 10 41402634 41409875 Dod06g2634 06 56139436 56148261 PCT