Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2634 ATGATCTCTTGCACTAGATGCACCTTCCTGTGCAACTCAGGCATAGATGGGTCGTCTTGCAGAGGCTTCTCTGGTTCAAAGAGAAGACGTTCGGGTCCTGTGAGAGTGGCGTGTTCTGCTTCAACAAGCAGCAGCAAGAGCTCAAACGACATCGTTGTGATGGCGACAACAGTGGACGTCGAAGACAATCCGACGGCATGCGGCGGAGTTAAGGATGTGTACGGCGAGGACAGGGCCACAGAGGATCAGTTTGTGACACCCTGGAGTGTCTCTGTTGCCAGTGGATATACTTTGTTGCGAGATCCTCACTTCAACAAAGGGTTGGCCTTCACTGAGAAAGAGAGGGATGCTCATTACTTGCGTGGTCTTCTTCCTCCAACAATTATTTGTCAAGAAACTCAGGTGAAGAAAATGATCCGACAAATACGCCAGTATCAAATTCCATTGCAGAAGTACATGGCAATGATGGATCTTCAGGTGAGGAATGAAAGATTGTTTTACAGGCTTCTTATTGAATATGTTGAGGAGTTACTCCCAGTTGTATACACTCCAACTGTTGGTGAAGCTTGCCAGAAATTTGGGAGCATCTTCATGAATCCTCAGGGTCTTTATATTAGTTTGAAAGAGAAAGGGAGGATTCTTGAAGTACTAAGGAATTGGCCTGAGAAGAACATTCAAGTCATTGTTGTAACTGACGGAGAACGGATCCTGGGTCTTGGCGATCTTGGCTGTCAGGGGATGGGAATACCAGTGGGGAAACTTTCTTTATATACTGCACTTGGCGGAGTTCGTCCTTCTGCTTGCTTGCCTATTACCATTGATGTTGGTACAAACAATGAGAAGCTGTTCAATGATGAATTATACATTGGTCTCAAGCATAAACGAGCAACTGGGCAGGAATATGCTGAACTTCTACATGAATTTATGACTGCAGTCAAGCAAAATTATGGAGAAAAAATTCTGGTTCAGTTTGAAGACTTTGCGAACCACAATGCTTTTGATCTACTTGAAAAATATAGGTCAACACATCTTGTTTTCAACGATGATATTCAGGGAACAGCGTCGGTGGTCCTTGCAGGACTCGTTGCAGCTCTGAATTTCGTCGGTGGAAACTTATCGGACCACGAGTTCTTATTCCTAGGTGCCGGAGAGGCTGGCACTGGAATAGCTGAACTCATAGCACTTGAACTATCGAAACGGACAAATGCTCCGTTGGATGAAGTGCGCCAGCACATTTGGTTGGTGGACTCAAAGGGATTGATTGTTAGTTCCCGTAAAGAATCTCTCCAGCATTTTAAGAAGCCGTGGGCTCATGAACATGAACCTGTTGCGGAACTTGTAGATGCTGTTAATCAAATTAAGCCAACAGTGTTGATTGGAACATCAGGACAAGGGAAAACTTTTACTCAAAATGTGGTTGAGGCCATGGCCTCCATTAATGAGAAACCTATTATCCTTGCTCTTTCCAACCCAACATCACAGTCAGAATGTACAGCTGAAGAGGCTTATACATGGACCCAGGGACGCGCCATTTTCGCTAGCGGAAGCCCATTTGACCGGGTTGAATATGATGGAAAAGTGCTTGTGCCTGGCCAGGCCAATAATGCATACATTTTTCCTGGATTTGGTCTTGGTTTAATAATGTCTGGTACAATCCGACTGCATGATGACCTCCTTCTGGCAGCTTCTGAGGCTTTGGCTTCACAAGTGACTCAGGAGGACTTTGACAAGGGGCTCATATACCCCCCATTCACTAACATCAGAAAGATTTCAGCTCACATTGCTGCCAGTGTGGCTGCTAAGGCCTATGAACTTGGCTTGGCCACTCGCCTTCCTCAACCTAAAGATTTGGTGAAGCTTGCTGAGAGCTCTATGTATAGCCCAGCCTATAGAAACTACCGGTGA 1905 0.4546 MISCTRCTFLCNSGIDGSSCRGFSGSKRRRSGPVRVACSASTSSSKSSNDIVVMATTVDVEDNPTACGGVKDVYGEDRATEDQFVTPWSVSVASGYTLLRDPHFNKGLAFTEKERDAHYLRGLLPPTIICQETQVKKMIRQIRQYQIPLQKYMAMMDLQVRNERLFYRLLIEYVEELLPVVYTPTVGEACQKFGSIFMNPQGLYISLKEKGRILEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLFNDELYIGLKHKRATGQEYAELLHEFMTAVKQNYGEKILVQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLVAALNFVGGNLSDHEFLFLGAGEAGTGIAELIALELSKRTNAPLDEVRQHIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVAELVDAVNQIKPTVLIGTSGQGKTFTQNVVEAMASINEKPIILALSNPTSQSECTAEEAYTWTQGRAIFASGSPFDRVEYDGKVLVPGQANNAYIFPGFGLGLIMSGTIRLHDDLLLAASEALASQVTQEDFDKGLIYPPFTNIRKISAHIAASVAAKAYELGLATRLPQPKDLVKLAESSMYSPAYRNYR* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2634 634 Gene3D - 348 634 - -
Dod06g2634 634 SMART malic_2 159 340 IPR012301 GO:0004471
Dod06g2634 634 Pfam Malic enzyme, NAD binding domain 350 602 IPR012302 GO:0051287
Dod06g2634 634 Gene3D - 93 347 IPR037062 GO:0004471
Dod06g2634 634 CDD NAD_bind_1_malic_enz 350 628 - -
Dod06g2634 634 PANTHER MALIC ENZYME-RELATED 17 634 - -
Dod06g2634 634 PANTHER MALIC ENZYME 17 634 - -
Dod06g2634 634 ProSitePatterns Malic enzymes signature. 346 362 IPR015884 GO:0004471
Dod06g2634 634 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 350 633 IPR036291 -
Dod06g2634 634 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 71 349 IPR046346 -
Dod06g2634 634 PIRSF ME 55 634 IPR001891 GO:0004470|GO:0004471
Dod06g2634 634 Pfam Malic enzyme, N-terminal domain 160 340 IPR012301 GO:0004471
Dod06g2634 634 SMART Malic_M_2 350 603 IPR012302 GO:0051287
Dod06g2634 634 PRINTS Malic enzyme signature 480 496 IPR001891 GO:0004470|GO:0004471
Dod06g2634 634 PRINTS Malic enzyme signature 165 189 IPR001891 GO:0004470|GO:0004471
Dod06g2634 634 PRINTS Malic enzyme signature 321 339 IPR001891 GO:0004470|GO:0004471
Dod06g2634 634 PRINTS Malic enzyme signature 346 362 IPR001891 GO:0004470|GO:0004471
Dod06g2634 634 PRINTS Malic enzyme signature 377 393 IPR001891 GO:0004470|GO:0004471
Dod06g2634 634 PRINTS Malic enzyme signature 261 283 IPR001891 GO:0004470|GO:0004471
Dod06g2634 634 PRINTS Malic enzyme signature 225 254 IPR001891 GO:0004470|GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2634 Dod-Chr6 56139436 56148261 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2634 K00029 - gmx:100791514 1035.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2634 06 56139436 56148261 Dod10g1959 10 41402634 41409875 ECH
Dod02g3519 02 72370893 72376364 Dod06g2634 06 56139436 56148261 ECH
Dod06g2634 06 56139436 56148261 Dod06g2634 06 56139436 56148261 ECH
Dod10g1959 10 41402634 41409875 Dod06g2634 06 56139436 56148261 PCT