Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1912 ATGGCTTATGCAGCGAAGAGTGAGGAGTGTTGTTCCACTCAGCTAATTGATGGAGATGGTGCATTCAATGGTGCCGGGATTGAGAACTTCATGAAGGAGGTTAAATTAGCCGAATGTGGCCTTTCATATGCTGTAGTTTCTATTATGGGTCCACAAAGTAGTGGCAAGAGCACACTATTAAATAATTTGTTCCTTACTGACTTCAGAGAGATGGATGCATTCAAGGGAAGGTCTCAGACAACCAAAGGTATTTGGATGGCAAGATGTGCTGGCATAGATCCTTGTACTCTTGTGATGGATTTAGAGGGTACTGATGGAAGAGAACGTGGAGAGGATGATACTGCATTTGAAAAGCAGAGTGCTCTTTTTGCTTTGGCTGTTTCAGATATTGTGCTAATAAACATGTGGTGTCATGACATTGGCCGTGAGCAAGCTGCTAACAAGCCACTTCTAAAAACTGTGTTTCAGGTCATGATGAGATTGTTTAGTCCACGCAAAACAACATTGATGTTTGTCATACGTGATAAAACAAGGACACCACTCGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAAAAGATTTGGGACTCTGTTCCTAAACCACAGGCCCACAAGGAAACCCCACTAAGTGAATTTTTTAATGTTGAAGTTGTTGCTCTTTCTAGTTTTGAAGAAAAGGAAGAGCAATTTAAGGAGCAGGTTGCCAGCTTGAGGCAACGATTTTATCATTCAATAGCTCCCGGTGGGCTTGCGGGGGATCGACGTGGAGCAGTTCCTGCTTCTGGCTTTTCTTTTAGTGCTCAAGAAATCTGGAAAGTCATTAAAGAAAACAAGGATCTTGACCTTCCTGCACATAAGGTCATGGTTGCTACTGTAAGATGTGAAGAAATTGCCAATGAGAAATATGCCCTTTTTGCTGCAAATGAGGACTGGTGTCAGTTGGAAGAGGCTGTGCAATCTGGCCCAGTTGCTGGATTTGGGAAAAAGCTCAGTTTACTCCTTGTTGCTTGTCTTTCAGAGTATGATGTTGAAGCCACTTATTTTGATGAAGGTGTGCGATCTACAAAACAAAAGCAGCTTCAAGAAAAATTGTTGCAACTTGTCCAACCAGCGTTCCAATCTGCCCTGGGACATATAAGGTCTGGAACTTTTGATAAGTTCAAGGAAGCATTTGACAAGGCTTTGAATAGAGGGGAAGGGTTTTCTGCCGCTGCTCATGATTGCATAGGGTCCTATATGGCTCAGTTTGATGAAGCATGTGCAGATGTTGTTATTGAAGTAGCAGACTGGGATACATCTAAAGTAAGGGAGAAACTCCATCGTGACATTGATGCACATGTTGCATCTGTGCGTGCAGCTAAGATGTCGGAACTTAATTCATCATATGAGGAAAAACTGAAGGAAGCCTTGTCTGGACCTGTTGAAGCGCTTTTTGATGGAGCTAATAGTGGTACTTGGTCATCAATAAGGAACCTTCTTAGGCGTGAGACTGAAGCAGCTGTTTCTGGGTTTTCTAATGCAGTTACCAGATTTGATATGGATGAACAAACACAAAAGAATATGATCATGAGTTTAGAGGATTATGCAAGGTGTCTGATAGAGGCAAAGGCTAGGGAAGAAGCTGGTAGAGTTCTAATCCGTATGAAGGACAAGTTTATGACATTGTTTAGTCATGATTCTGATTCAATGCCTCGTATTTGGACGGGAAAAGAAGATATTCTTGCCATCACCAAGACTGCCCGCTCTGCATCCTTGAAGTTGCTGTCTGTTATGGCTGTAATTCGTTTGGATGATAATGATGATGTTGATAAAATAGAAAGAACTTTATCAGTTGCATTGATGGATTCATCCAGCAATGCTAAAGACAGGAGCATCATGGTAGTTGATCCACTGGCTTCAAGCACTTGGGAGCAGGTTCCAGCCTCTAAAACATTGATCACACCTGTCCAGTGCAAATCTTTGTGGAGGCAATTTAAAATTGAGACAGAATACAGTGTTTCTCAGGCCATTTCTGCACAGGAAGCCAACAAGCATAATAACAACTGGTTACCACCACCATGGGCGATTGTTGCCTTGATTATTCTGGGATTTAATGAATTTATGACACTTCTAAGAAATCCCTTGTATTTGGGTTTCATATTTGTTGGTTATCTTCTCATTAAAGCCTTATGGGTGCAGCTTGACATTAAGGGTGAATTCCGCAACGGAGCTCTTCCGGGAATCATATCCTTGTCTAGCAAGTTTATTCCAACTATCATGAATCTAATGAGAAAACTAGCAGAGGAGGGGCAGAGTCCTGCAACTAACAATCCTCAGAGAAATCCACCACAAAGTAACCACAATGCTGTTGCTGCTGGTAGCATTATGTCATGTAGTGCTTCGTCTAATGTAACTTCATTGGACAATGGAACCGAGTACACCAGTTCATCAAAGGATGATTAG 2445 0.418 MAYAAKSEECCSTQLIDGDGAFNGAGIENFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNNLFLTDFREMDAFKGRSQTTKGIWMARCAGIDPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSFEEKEEQFKEQVASLRQRFYHSIAPGGLAGDRRGAVPASGFSFSAQEIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYALFAANEDWCQLEEAVQSGPVAGFGKKLSLLLVACLSEYDVEATYFDEGVRSTKQKQLQEKLLQLVQPAFQSALGHIRSGTFDKFKEAFDKALNRGEGFSAAAHDCIGSYMAQFDEACADVVIEVADWDTSKVREKLHRDIDAHVASVRAAKMSELNSSYEEKLKEALSGPVEALFDGANSGTWSSIRNLLRRETEAAVSGFSNAVTRFDMDEQTQKNMIMSLEDYARCLIEAKAREEAGRVLIRMKDKFMTLFSHDSDSMPRIWTGKEDILAITKTARSASLKLLSVMAVIRLDDNDDVDKIERTLSVALMDSSSNAKDRSIMVVDPLASSTWEQVPASKTLITPVQCKSLWRQFKIETEYSVSQAISAQEANKHNNNWLPPPWAIVALIILGFNEFMTLLRNPLYLGFIFVGYLLIKALWVQLDIKGEFRNGALPGIISLSSKFIPTIMNLMRKLAEEGQSPATNNPQRNPPQSNHNAVAAGSIMSCSASSNVTSLDNGTEYTSSSKDD* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1912 814 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 4 814 - -
Dod10g1912 814 Hamap Protein SEY1 [SEY1]. 12 768 IPR008803 -
Dod10g1912 814 MobiDBLite consensus disorder prediction 795 814 - -
Dod10g1912 814 Gene3D - 25 254 IPR027417 -
Dod10g1912 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 252 IPR027417 -
Dod10g1912 814 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 49 284 - -
Dod10g1912 814 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 40 255 IPR030386 GO:0005525
Dod10g1912 814 Pfam Sey1 three-helix bundle domain 326 763 IPR046758 -
Dod10g1912 814 Coils Coil 221 241 - -
Dod10g1912 814 MobiDBLite consensus disorder prediction 764 783 - -
Dod10g1912 814 CDD GBP 39 245 - -
Dod10g1912 814 PANTHER PROTEIN SEY1 4 814 IPR008803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1912 Dod-Chr10 40768222 40782839 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1912 K22698 - gmx:100777656 1353.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1912 10 40768222 40782839 Dod06g2721 06 58300940 58310188 PCT