Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod06g2721 ATGGCAAATAGTGGTTGTTGTTCAACTCAGCTTATTGATGGAGATGGTACATTCAATGTTGTCGGGATTGACAACTTCATGAAGGAGGTGAAATTGAGTGAATGCGGGCTTTCGTATGCTGTAGTTTCTATTATGGGTCCTCAAAGTAGTGGCAAGAGCACCCTATTAAATCATTTGTTTGGTACCAACTTCAGAGAGATGGATGCTTTTAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTGCTGGCATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGTGGAGAGGATGATACTGCATTTGAAAAGCAGAGTGCCTTATTTGCTCTTGCTGTCTCTGATATAGTGCTAATTAACATGTGGTGTCATGACATTGGCCGTGAGCAAGCTGCTAATAAGCCGCTCTTGAAAACTGTCTTTCAGGTCATGATGAGATTGTTTAGTCCACGCAAAACAACATTGCTGTTTGTCATACGTGATAAAACACGGACACCACTTGAAAATTTAGAACCTGTTTTGCGAGAAGATATTCAGAAGATATGGGACTCAGTTCCTAAACCACAAGCCCACAAGGAAACCCCGCTAAGTGAATTTTTCAATGTTGAAGTTGTTGCTCTTTCTAGTTATGAAGAAAAGGAAGAGCAATTTAAGGAGCAGGTTGCCAGCTTGAGGCAACGATTTCATCATTCTATCGCTCCTGGTGGGCTTGCAGGGGACCGGCGCGGAGTAGTTCCTGCTTCAGGCTTCTCTTTTAGTTCTCAGCAAATCTGGAAAGTCATCAAGGAGAACAAGGACCTTGACCTTCCTGCACATAAGGTTATGGTTGCGACTGTACGATGTGAGGAAATTGCCAATGAAAAATATGCCTCTTTTGCTGCAAATGAGGAGTGGTGTCAATTGGAAGAAGCGGTACAATCTGGCCCTATTCCTGGATTTGGGAAAAAACTCAATTCAGTCCTGGTTGCTTGTTTGTCAGAGTATGATGCTGAAGCTACGTATTTTGATGAAGGTGTGAGATCTGCAAAACAAAAGCAACTCCAAGAAAAATTATTGCAACTTGTCCAACCATCATTCCAATCTGCTCTGGGACATATAAGATCTGGAACTTTGGATAAATTCAAGGAGGCATTTGACAAGGCTTTGAATAGAGGAGAAGGGTTTTCTTTGGCTGCCAATAATTGCATTGAGTCTTATATGGCTAAATTCGATGAAGCATGTGCAGATGTTGTTATTGAACAAGCAAACTGGGATACATCTAAAGTAAGGGAGAAACTGCGGCGTGATATTGATGCACATGTGCAATCTGTACGTGATGCTAAGATTTCTGAACTTACTTCATCATATGAGGAAAAACTGAAACAAGCCTTGTCTGGACCTGTTGAAGCTCTCTTGGATGGAGCTAGTAGCGATACTTGGCCATCAATAAGGAACCTTCTTAGGCGTGAGACTGAATCAGCTGTTTCAGGGTTCTCTGCTGCTCTTACTGGGTTTGATATGGATGAAGATACAAGGCAGAAAATGATTTTGAGTTTGAAGGATTATGCTACAGATGTGGTAGAAGGAAAGGCTAGGGATGAAGCTGGAAGAGTTCTAATCCGTATGAAGGACAGGTTTACGATGTTGTTTAGCCATGATTCTGATTCGATGCCTCGTGTTTGGACGGGCAAAGAAGATATCAGAGCCATCACCAAGACTGCTCGCTCTGCTTCTTTGAAGTTGCTATCTGTCATGGCTGCAATTCGTTTGGATGACGGTGATACAGATAATATTGAGAAAACATTATCAGTTGCCTTGGTGGATTCATCAAGCAGTACTGCTAATAGGAGCATCACAATAGTTGATCCACTAGCTTCTAGCTCTTGGGAACAGGTCCCATCCTCTAAAACATTGATTACCCCTGTCCAATGCAAATCCTTGTGGAGGCAATTCAAGATAGAGACAGAATACAGTGTTTCTCAGGCCATTTCTGCACAGGAGGCCAACAAGCGTAATAACAACTGGTTACCTCCTCCATGGGCAATAGTTGCTTTGGTTATTCTTGGATTTAATGAATTTATGACACTTCTAAGAAATCCCTTGTATTTGGGTGTCATCTTTGTTGGTTTTCTTCTCATTAAAGCCCTATGGGTGCAGCTTGACATTCCGGGTGAATTCCGCAATGGAGCTCTGCCGGGAATCATATCCTTGTCTTCCAAGTTTGTTCCAACAATCATGAACCTTATGAAAAGACTAGCAGAGGAGGGACAAAACCCTGCAACTAACAATCCTCAGAGAAACCAACCGAAAAACAATTACGATGCTGTTACTGCTGGTAGTACCATGTCATCTATGGCTTCATCCAATGTAACCTCATTCGAAAACAATGGAACCGAATACGCCAGTTCATCGAAACATGAGTAG 2433 0.4238 MANSGCCSTQLIDGDGTFNVVGIDNFMKEVKLSECGLSYAVVSIMGPQSSGKSTLLNHLFGTNFREMDAFKGRSQTTKGIWMARCAGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEEQFKEQVASLRQRFHHSIAPGGLAGDRRGVVPASGFSFSSQQIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYASFAANEEWCQLEEAVQSGPIPGFGKKLNSVLVACLSEYDAEATYFDEGVRSAKQKQLQEKLLQLVQPSFQSALGHIRSGTLDKFKEAFDKALNRGEGFSLAANNCIESYMAKFDEACADVVIEQANWDTSKVREKLRRDIDAHVQSVRDAKISELTSSYEEKLKQALSGPVEALLDGASSDTWPSIRNLLRRETESAVSGFSAALTGFDMDEDTRQKMILSLKDYATDVVEGKARDEAGRVLIRMKDRFTMLFSHDSDSMPRVWTGKEDIRAITKTARSASLKLLSVMAAIRLDDGDTDNIEKTLSVALVDSSSSTANRSITIVDPLASSSWEQVPSSKTLITPVQCKSLWRQFKIETEYSVSQAISAQEANKRNNNWLPPPWAIVALVILGFNEFMTLLRNPLYLGVIFVGFLLIKALWVQLDIPGEFRNGALPGIISLSSKFVPTIMNLMKRLAEEGQNPATNNPQRNQPKNNYDAVTAGSTMSSMASSNVTSFENNGTEYASSSKHE* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod06g2721 810 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 45 280 - -
Dod06g2721 810 Pfam Sey1 three-helix bundle domain 322 758 IPR046758 -
Dod06g2721 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 272 IPR027417 -
Dod06g2721 810 MobiDBLite consensus disorder prediction 760 803 - -
Dod06g2721 810 MobiDBLite consensus disorder prediction 760 810 - -
Dod06g2721 810 CDD GBP 35 238 - -
Dod06g2721 810 PANTHER PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 4 784 - -
Dod06g2721 810 Coils Coil 217 237 - -
Dod06g2721 810 Hamap Protein SEY1 [SEY1]. 8 763 IPR008803 -
Dod06g2721 810 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 36 251 IPR030386 GO:0005525
Dod06g2721 810 PANTHER PROTEIN SEY1 4 784 IPR008803 -
Dod06g2721 810 Gene3D - 24 244 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod06g2721 Dod-Chr6 58300940 58310188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod06g2721 K22698 - gmx:100777656 1420.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod06g2721 06 58300940 58310188 Dod06g2721 06 58300940 58310188 ECH
Dod10g1912 10 40768222 40782839 Dod06g2721 06 58300940 58310188 PCT