Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1851 ATGATGAAGATGGGAAACAAGTTACCAATCATTCTAGTGATGGGCATTATCACGATGATGACAGTGCCCAAGAACATTGTGAGTGCCCAAAACGTGGCTGACATTGTCACACAAGATTTCTTCAATGGCATAATTAATCAGGCAGATCCTAGCTGTGAAGGGAAGAACTTCTACACACGTGATGGTTTCCTCAGTGCTCTCAACTCCTACAATCAATTCGGTAATCTTGGATCTGTTGATGACTCCAAGCGTGAGATTGCTGCTGCTTTTGCCCACTTCACACATGAAACTGGACACTTTTGCTACATTAACGAGATTAATGGTGCATCACATAACTACTGCGACCCAAGCTTCACACAGTACCCATGTAACCCTAACAAGCAGTACTTTGGGCGTGGACCGCTTCAACTAACATGGAACTACAACTACGGGGCGGCTGGACAAGACAACAATTTCGATGGATTGAACGCTCCAGAAACTGTGGGCAATGATGTTGTGGTGTCCTTCAAGGCAGCCTTGTGGTTTTGGATGAAAAATGTGAGGCCAGTGGTGAGCCAGGGCTTTGGGGCCACCATCAGGGCCATCAACTCAGGTGAATGTGATGGTGGTAATCCCAGCGAGGTTCAGGATCGCGTCAATTACTACGAACAATACTGCTCACAATTCGGCGTTGCTCCTGGGGATAATGTTTCTTGCTAA 699 0.4649 MMKMGNKLPIILVMGIITMMTVPKNIVSAQNVADIVTQDFFNGIINQADPSCEGKNFYTRDGFLSALNSYNQFGNLGSVDDSKREIAAAFAHFTHETGHFCYINEINGASHNYCDPSFTQYPCNPNKQYFGRGPLQLTWNYNYGAAGQDNNFDGLNAPETVGNDVVVSFKAALWFWMKNVRPVVSQGFGATIRAINSGECDGGNPSEVQDRVNYYEQYCSQFGVAPGDNVSC* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1851 232 CDD chitinase_GH19 36 232 - -
Dod10g1851 232 Gene3D - 30 232 - -
Dod10g1851 232 PIRSF Endochitinase 10 232 IPR016283 GO:0004568|GO:0005975
Dod10g1851 232 Gene3D Endochitinase, domain 2 106 162 - -
Dod10g1851 232 PANTHER ENDOCHITINASE EP3-LIKE 5 232 - -
Dod10g1851 232 PANTHER CHITINASE-RELATED 5 232 - -
Dod10g1851 232 SUPERFAMILY Lysozyme-like 31 232 IPR023346 -
Dod10g1851 232 Pfam Chitinase class I 186 232 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod10g1851 232 Pfam Chitinase class I 35 182 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod10g1851 232 ProSitePatterns Chitinases family 19 signature 2. 167 177 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dod10g1851 232 ProSitePatterns Chitinases family 19 signature 1. 52 74 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1851 Dod-Chr10 39917826 39919157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1851 23 232 Glycoside Hydrolase AT3G54420 66.351 4.29e-102 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1851 K01183 - qsu:111999188 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1851 10 39917826 39919157 Dod03g3073 03 63427388 63428908 PCT